Protein–RNA interactions for Protein: Q9CQI6

Cotl1, Coactosin-like protein, mousemouse

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cotl1Q9CQI6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.41■□□□□ 0.54
Cotl1Q9CQI6 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cotl1Q9CQI6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Cotl1Q9CQI6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Cotl1Q9CQI6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC18.4■□□□□ 0.54
Cotl1Q9CQI6 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Cotl1Q9CQI6 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Cotl1Q9CQI6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
Cotl1Q9CQI6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cotl1Q9CQI6 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.39■□□□□ 0.53
Cotl1Q9CQI6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.39■□□□□ 0.53
Cotl1Q9CQI6 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Cotl1Q9CQI6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Cotl1Q9CQI6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
Cotl1Q9CQI6 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cotl1Q9CQI6 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Cotl1Q9CQI6 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cotl1Q9CQI6 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Cotl1Q9CQI6 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cotl1Q9CQI6 Gm43445-201ENSMUST00000198564 2091 ntBASIC18.37■□□□□ 0.53
Cotl1Q9CQI6 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cotl1Q9CQI6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Cotl1Q9CQI6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Cotl1Q9CQI6 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Cotl1Q9CQI6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.35■□□□□ 0.53
Cotl1Q9CQI6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
Cotl1Q9CQI6 Gm6345-201ENSMUST00000180378 1691 ntBASIC18.34■□□□□ 0.53
Cotl1Q9CQI6 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Cotl1Q9CQI6 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Cotl1Q9CQI6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cotl1Q9CQI6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cotl1Q9CQI6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Cotl1Q9CQI6 Notumos-201ENSMUST00000151998 2659 ntBASIC18.33■□□□□ 0.52
Cotl1Q9CQI6 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Cotl1Q9CQI6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Cotl1Q9CQI6 Peli2-204ENSMUST00000226513 1320 ntBASIC18.31■□□□□ 0.52
Cotl1Q9CQI6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cotl1Q9CQI6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cotl1Q9CQI6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cotl1Q9CQI6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Cotl1Q9CQI6 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cotl1Q9CQI6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Cotl1Q9CQI6 Eif4e2-203ENSMUST00000113230 1569 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Cotl1Q9CQI6 Amer2-203ENSMUST00000225247 2662 ntBASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Cotl1Q9CQI6 Cebpb-201ENSMUST00000070642 1504 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Akt1s1-202ENSMUST00000107880 1757 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Cotl1Q9CQI6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.27■□□□□ 0.52
Cotl1Q9CQI6 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.26■□□□□ 0.51
Cotl1Q9CQI6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
Cotl1Q9CQI6 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Cotl1Q9CQI6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Cotl1Q9CQI6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Cotl1Q9CQI6 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Cotl1Q9CQI6 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Cotl1Q9CQI6 Gm30346-201ENSMUST00000218641 1699 ntBASIC18.23■□□□□ 0.51
Cotl1Q9CQI6 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cotl1Q9CQI6 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cotl1Q9CQI6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cotl1Q9CQI6 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Cotl1Q9CQI6 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Cotl1Q9CQI6 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Mrps7-201ENSMUST00000058109 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Cotl1Q9CQI6 Gm5814-201ENSMUST00000177586 378 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Cotl1Q9CQI6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC18.21■□□□□ 0.5
Cotl1Q9CQI6 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Cotl1Q9CQI6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Cotl1Q9CQI6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Cotl1Q9CQI6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Cotl1Q9CQI6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cotl1Q9CQI6 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Cotl1Q9CQI6 Dapk3-202ENSMUST00000178422 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms