Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Thumpd1Q99J36 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd1Q99J36 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Thumpd1Q99J36 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Thumpd1Q99J36 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Thumpd1Q99J36 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Thumpd1Q99J36 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Thumpd1Q99J36 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Thumpd1Q99J36 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Thumpd1Q99J36 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
Thumpd1Q99J36 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Thumpd1Q99J36 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Thumpd1Q99J36 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Thumpd1Q99J36 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd1Q99J36 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd1Q99J36 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Thumpd1Q99J36 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd1Q99J36 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Thumpd1Q99J36 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Thumpd1Q99J36 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Thumpd1Q99J36 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd1Q99J36 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC21.12■□□□□ 0.97
Thumpd1Q99J36 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Thumpd1Q99J36 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Thumpd1Q99J36 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Gm16148-201ENSMUST00000119653 893 ntBASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Thumpd1Q99J36 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Thumpd1Q99J36 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd1Q99J36 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd1Q99J36 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Thumpd1Q99J36 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Thumpd1Q99J36 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Thumpd1Q99J36 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd1Q99J36 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Thumpd1Q99J36 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Thumpd1Q99J36 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Thumpd1Q99J36 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Thumpd1Q99J36 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Thumpd1Q99J36 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Thumpd1Q99J36 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Thumpd1Q99J36 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Gm24804-201ENSMUST00000174982 85 ntBASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Thumpd1Q99J36 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21■□□□□ 0.95
Thumpd1Q99J36 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd1Q99J36 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21■□□□□ 0.95
Thumpd1Q99J36 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Thumpd1Q99J36 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
Thumpd1Q99J36 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Thumpd1Q99J36 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Thumpd1Q99J36 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Thumpd1Q99J36 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Thumpd1Q99J36 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC20.97■□□□□ 0.95
Thumpd1Q99J36 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 53 ms