Protein–RNA interactions for Protein: Q96SB8

SMC6, Structural maintenance of chromosomes protein 6, humanhuman

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6Q96SB8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMC6Q96SB8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
SMC6Q96SB8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
SMC6Q96SB8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.08■■□□□ 1.76
SMC6Q96SB8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.76
SMC6Q96SB8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.07■■□□□ 1.76
SMC6Q96SB8 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.07■■□□□ 1.76
SMC6Q96SB8 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SMC6Q96SB8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.07■■□□□ 1.76
SMC6Q96SB8 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC26.06■■□□□ 1.76
SMC6Q96SB8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.06■■□□□ 1.76
SMC6Q96SB8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.05■■□□□ 1.76
SMC6Q96SB8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SMC6Q96SB8 AC010864.1-201ENST00000609407 1511 ntBASIC26.05■■□□□ 1.76
SMC6Q96SB8 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
SMC6Q96SB8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMC6Q96SB8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SMC6Q96SB8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26.03■■□□□ 1.76
SMC6Q96SB8 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SMC6Q96SB8 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC26.03■■□□□ 1.76
SMC6Q96SB8 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMC6Q96SB8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SMC6Q96SB8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMC6Q96SB8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SMC6Q96SB8 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
SMC6Q96SB8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SMC6Q96SB8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
SMC6Q96SB8 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
SMC6Q96SB8 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
SMC6Q96SB8 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SMC6Q96SB8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMC6Q96SB8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC26■■□□□ 1.75
SMC6Q96SB8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SMC6Q96SB8 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.99■■□□□ 1.75
SMC6Q96SB8 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.99■■□□□ 1.75
SMC6Q96SB8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC6Q96SB8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
SMC6Q96SB8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC25.98■■□□□ 1.75
SMC6Q96SB8 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC6Q96SB8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC25.98■■□□□ 1.75
SMC6Q96SB8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SMC6Q96SB8 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
SMC6Q96SB8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
SMC6Q96SB8 BX255925.1-201ENST00000566954 1854 ntBASIC25.96■■□□□ 1.75
SMC6Q96SB8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
SMC6Q96SB8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.96■■□□□ 1.75
SMC6Q96SB8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
SMC6Q96SB8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
SMC6Q96SB8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
SMC6Q96SB8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.95■■□□□ 1.74
SMC6Q96SB8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
SMC6Q96SB8 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
SMC6Q96SB8 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
SMC6Q96SB8 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
SMC6Q96SB8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.92■■□□□ 1.74
SMC6Q96SB8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
SMC6Q96SB8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC6Q96SB8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.91■■□□□ 1.74
SMC6Q96SB8 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
SMC6Q96SB8 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMC6Q96SB8 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
SMC6Q96SB8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMC6Q96SB8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
SMC6Q96SB8 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
SMC6Q96SB8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMC6Q96SB8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
SMC6Q96SB8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.89■■□□□ 1.73
SMC6Q96SB8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.73
SMC6Q96SB8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC25.88■■□□□ 1.73
SMC6Q96SB8 AL133380.1-201ENST00000506013 324 ntBASIC25.88■■□□□ 1.73
SMC6Q96SB8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
SMC6Q96SB8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC25.87■■□□□ 1.73
SMC6Q96SB8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.87■■□□□ 1.73
SMC6Q96SB8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
SMC6Q96SB8 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC25.86■■□□□ 1.73
SMC6Q96SB8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.86■■□□□ 1.73
SMC6Q96SB8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMC6Q96SB8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
SMC6Q96SB8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC6Q96SB8 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC6Q96SB8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC25.84■■□□□ 1.73
SMC6Q96SB8 AP004833.2-201ENST00000532228 1454 ntBASIC25.84■■□□□ 1.73
SMC6Q96SB8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMC6Q96SB8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.73
SMC6Q96SB8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC25.83■■□□□ 1.72
SMC6Q96SB8 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC25.83■■□□□ 1.72
SMC6Q96SB8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SMC6Q96SB8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.82■■□□□ 1.72
SMC6Q96SB8 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
SMC6Q96SB8 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.82■■□□□ 1.72
SMC6Q96SB8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC25.82■■□□□ 1.72
SMC6Q96SB8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMC6Q96SB8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SMC6Q96SB8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
SMC6Q96SB8 AC025431.1-201ENST00000559684 874 ntTSL 3 BASIC25.81■■□□□ 1.72
SMC6Q96SB8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC25.81■■□□□ 1.72
SMC6Q96SB8 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC6Q96SB8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SMC6Q96SB8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SMC6Q96SB8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms