Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
PCDH15Q96QU1 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PCDH15Q96QU1 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDH15Q96QU1 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
PCDH15Q96QU1 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.82■■□□□ 1.72
PCDH15Q96QU1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
PCDH15Q96QU1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
PCDH15Q96QU1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH15Q96QU1 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH15Q96QU1 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.79■■□□□ 1.72
PCDH15Q96QU1 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH15Q96QU1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH15Q96QU1 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.78■■□□□ 1.72
PCDH15Q96QU1 TPT1-202ENST00000379055 948 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH15Q96QU1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
PCDH15Q96QU1 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
PCDH15Q96QU1 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PCDH15Q96QU1 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC25.77■■□□□ 1.72
PCDH15Q96QU1 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH15Q96QU1 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.72
PCDH15Q96QU1 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH15Q96QU1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.76■■□□□ 1.71
PCDH15Q96QU1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDH15Q96QU1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.75■■□□□ 1.71
PCDH15Q96QU1 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH15Q96QU1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH15Q96QU1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH15Q96QU1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.74■■□□□ 1.71
PCDH15Q96QU1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH15Q96QU1 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH15Q96QU1 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH15Q96QU1 RNF126P1-201ENST00000567452 1320 ntBASIC25.73■■□□□ 1.71
PCDH15Q96QU1 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH15Q96QU1 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDH15Q96QU1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH15Q96QU1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH15Q96QU1 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH15Q96QU1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDH15Q96QU1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDH15Q96QU1 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH15Q96QU1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH15Q96QU1 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH15Q96QU1 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
PCDH15Q96QU1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC25.68■■□□□ 1.7
PCDH15Q96QU1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH15Q96QU1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH15Q96QU1 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.67■■□□□ 1.7
PCDH15Q96QU1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH15Q96QU1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH15Q96QU1 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH15Q96QU1 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH15Q96QU1 CEP120-209ENST00000515110 606 ntTSL 3 BASIC25.66■■□□□ 1.7
PCDH15Q96QU1 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
PCDH15Q96QU1 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH15Q96QU1 NTF6A-201ENST00000591175 560 ntBASIC25.65■■□□□ 1.7
PCDH15Q96QU1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH15Q96QU1 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC25.64■■□□□ 1.7
PCDH15Q96QU1 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH15Q96QU1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH15Q96QU1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.63■■□□□ 1.69
PCDH15Q96QU1 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC25.63■■□□□ 1.69
PCDH15Q96QU1 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH15Q96QU1 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
PCDH15Q96QU1 AC012354.3-201ENST00000623734 483 ntBASIC25.62■■□□□ 1.69
PCDH15Q96QU1 AC010864.1-201ENST00000609407 1511 ntBASIC25.62■■□□□ 1.69
PCDH15Q96QU1 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PCDH15Q96QU1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
PCDH15Q96QU1 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
PCDH15Q96QU1 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH15Q96QU1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH15Q96QU1 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH15Q96QU1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH15Q96QU1 AL161658.1-201ENST00000623641 1967 ntBASIC25.6■■□□□ 1.69
PCDH15Q96QU1 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.6■■□□□ 1.69
PCDH15Q96QU1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PCDH15Q96QU1 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.59■■□□□ 1.69
PCDH15Q96QU1 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH15Q96QU1 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
PCDH15Q96QU1 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC25.57■■□□□ 1.68
PCDH15Q96QU1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH15Q96QU1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PCDH15Q96QU1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC25.55■■□□□ 1.68
PCDH15Q96QU1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
PCDH15Q96QU1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.55■■□□□ 1.68
PCDH15Q96QU1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.55■■□□□ 1.68
PCDH15Q96QU1 AC022413.1-201ENST00000624602 984 ntBASIC25.55■■□□□ 1.68
PCDH15Q96QU1 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
PCDH15Q96QU1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.53■■□□□ 1.68
PCDH15Q96QU1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH15Q96QU1 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PCDH15Q96QU1 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH15Q96QU1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH15Q96QU1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.51■■□□□ 1.67
PCDH15Q96QU1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH15Q96QU1 HES4-202ENST00000428771 1040 ntTSL 2 BASIC25.51■■□□□ 1.67
PCDH15Q96QU1 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PCDH15Q96QU1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH15Q96QU1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH15Q96QU1 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PCDH15Q96QU1 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.5■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms