Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 DUX4L23-201ENST00000615195 1269 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 DUX4L24-201ENST00000617576 1269 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 DUX4L22-201ENST00000618238 1269 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 DUX4L20-201ENST00000619712 1269 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 DUX4L21-201ENST00000622058 1269 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 DUX4L10-201ENST00000622460 1267 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 DUX4L25-201ENST00000624915 1269 ntBASIC21.19■□□□□ 0.98
ZNF48Q96MX3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF48Q96MX3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
ZNF48Q96MX3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC21.19■□□□□ 0.98
ZNF48Q96MX3 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF48Q96MX3 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF48Q96MX3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
ZNF48Q96MX3 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
ZNF48Q96MX3 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ZNF48Q96MX3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.16■□□□□ 0.98
ZNF48Q96MX3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC21.16■□□□□ 0.98
ZNF48Q96MX3 HSD17B1P1-201ENST00000590052 955 ntBASIC21.15■□□□□ 0.98
ZNF48Q96MX3 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ZNF48Q96MX3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ZNF48Q96MX3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC21.14■□□□□ 0.97
ZNF48Q96MX3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
ZNF48Q96MX3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
ZNF48Q96MX3 CHML-204ENST00000638121 920 ntTSL 2 BASIC21.13■□□□□ 0.97
ZNF48Q96MX3 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
ZNF48Q96MX3 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF48Q96MX3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
ZNF48Q96MX3 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF48Q96MX3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.12■□□□□ 0.97
ZNF48Q96MX3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF48Q96MX3 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF48Q96MX3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF48Q96MX3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
ZNF48Q96MX3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
ZNF48Q96MX3 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
ZNF48Q96MX3 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
ZNF48Q96MX3 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC21.1■□□□□ 0.97
ZNF48Q96MX3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
ZNF48Q96MX3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
ZNF48Q96MX3 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
ZNF48Q96MX3 AC010864.1-201ENST00000609407 1511 ntBASIC21.08■□□□□ 0.96
ZNF48Q96MX3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
ZNF48Q96MX3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.07■□□□□ 0.96
ZNF48Q96MX3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ZNF48Q96MX3 ABHD17AP3-201ENST00000503096 1137 ntBASIC21.07■□□□□ 0.96
ZNF48Q96MX3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC21.07■□□□□ 0.96
ZNF48Q96MX3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ZNF48Q96MX3 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC21.06■□□□□ 0.96
ZNF48Q96MX3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.05■□□□□ 0.96
ZNF48Q96MX3 BRD4-212ENST00000630599 726 ntTSL 2 BASIC21.05■□□□□ 0.96
ZNF48Q96MX3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ZNF48Q96MX3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC21.04■□□□□ 0.96
ZNF48Q96MX3 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF48Q96MX3 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
ZNF48Q96MX3 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
ZNF48Q96MX3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF48Q96MX3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC21.03■□□□□ 0.96
ZNF48Q96MX3 LINC00273-201ENST00000539813 1452 ntBASIC21.03■□□□□ 0.96
ZNF48Q96MX3 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
ZNF48Q96MX3 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC21.02■□□□□ 0.96
ZNF48Q96MX3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
ZNF48Q96MX3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF48Q96MX3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF48Q96MX3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.01■□□□□ 0.95
ZNF48Q96MX3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC21.01■□□□□ 0.95
ZNF48Q96MX3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ZNF48Q96MX3 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF48Q96MX3 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF48Q96MX3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21■□□□□ 0.95
ZNF48Q96MX3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF48Q96MX3 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF48Q96MX3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ZNF48Q96MX3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF48Q96MX3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.99■□□□□ 0.95
ZNF48Q96MX3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF48Q96MX3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ZNF48Q96MX3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ZNF48Q96MX3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZNF48Q96MX3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZNF48Q96MX3 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZNF48Q96MX3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.96■□□□□ 0.95
ZNF48Q96MX3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC20.95■□□□□ 0.94
ZNF48Q96MX3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC20.95■□□□□ 0.94
ZNF48Q96MX3 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZNF48Q96MX3 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF48Q96MX3 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF48Q96MX3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZNF48Q96MX3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
ZNF48Q96MX3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC20.93■□□□□ 0.94
ZNF48Q96MX3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms