Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC22.44■■□□□ 1.18
SPG11Q96JI7 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPG11Q96JI7 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC22.43■■□□□ 1.18
SPG11Q96JI7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.42■■□□□ 1.18
SPG11Q96JI7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.42■■□□□ 1.18
SPG11Q96JI7 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SPG11Q96JI7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SPG11Q96JI7 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SPG11Q96JI7 AC018358.1-201ENST00000631079 1402 ntBASIC22.41■■□□□ 1.18
SPG11Q96JI7 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.41■■□□□ 1.18
SPG11Q96JI7 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPG11Q96JI7 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
SPG11Q96JI7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
SPG11Q96JI7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
SPG11Q96JI7 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
SPG11Q96JI7 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
SPG11Q96JI7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
SPG11Q96JI7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.37■■□□□ 1.17
SPG11Q96JI7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC22.37■■□□□ 1.17
SPG11Q96JI7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
SPG11Q96JI7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
SPG11Q96JI7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPG11Q96JI7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
SPG11Q96JI7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC22.35■■□□□ 1.17
SPG11Q96JI7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
SPG11Q96JI7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPG11Q96JI7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPG11Q96JI7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPG11Q96JI7 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC22.33■■□□□ 1.17
SPG11Q96JI7 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.33■■□□□ 1.17
SPG11Q96JI7 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
SPG11Q96JI7 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
SPG11Q96JI7 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
SPG11Q96JI7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC22.33■■□□□ 1.17
SPG11Q96JI7 AC019069.1-201ENST00000610008 1333 ntBASIC22.33■■□□□ 1.16
SPG11Q96JI7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
SPG11Q96JI7 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SPG11Q96JI7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.32■■□□□ 1.16
SPG11Q96JI7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
SPG11Q96JI7 AL033527.3-201ENST00000566366 1196 ntBASIC22.32■■□□□ 1.16
SPG11Q96JI7 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.31■■□□□ 1.16
SPG11Q96JI7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.31■■□□□ 1.16
SPG11Q96JI7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.31■■□□□ 1.16
SPG11Q96JI7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPG11Q96JI7 AC022413.1-201ENST00000624602 984 ntBASIC22.3■■□□□ 1.16
SPG11Q96JI7 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC22.3■■□□□ 1.16
SPG11Q96JI7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SPG11Q96JI7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
SPG11Q96JI7 LINC00273-201ENST00000539813 1452 ntBASIC22.3■■□□□ 1.16
SPG11Q96JI7 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC22.29■■□□□ 1.16
SPG11Q96JI7 HES4-202ENST00000428771 1040 ntTSL 2 BASIC22.29■■□□□ 1.16
SPG11Q96JI7 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPG11Q96JI7 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
SPG11Q96JI7 TSPY13P-201ENST00000338964 914 ntBASIC22.29■■□□□ 1.16
SPG11Q96JI7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
SPG11Q96JI7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPG11Q96JI7 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SPG11Q96JI7 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
SPG11Q96JI7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
SPG11Q96JI7 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SPG11Q96JI7 AC008813.1-201ENST00000536597 885 ntBASIC22.26■■□□□ 1.15
SPG11Q96JI7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
SPG11Q96JI7 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.26■■□□□ 1.15
SPG11Q96JI7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.25■■□□□ 1.15
SPG11Q96JI7 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SPG11Q96JI7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SPG11Q96JI7 KRT18P60-201ENST00000312876 1297 ntBASIC22.23■■□□□ 1.15
SPG11Q96JI7 RARRES2P1-201ENST00000474487 481 ntBASIC22.23■■□□□ 1.15
SPG11Q96JI7 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SPG11Q96JI7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.22■■□□□ 1.15
SPG11Q96JI7 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
SPG11Q96JI7 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SPG11Q96JI7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.21■■□□□ 1.15
SPG11Q96JI7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SPG11Q96JI7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.2■■□□□ 1.14
SPG11Q96JI7 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPG11Q96JI7 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPG11Q96JI7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
SPG11Q96JI7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC22.2■■□□□ 1.14
SPG11Q96JI7 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
SPG11Q96JI7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.2■■□□□ 1.14
SPG11Q96JI7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
SPG11Q96JI7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SPG11Q96JI7 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC22.18■■□□□ 1.14
SPG11Q96JI7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPG11Q96JI7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPG11Q96JI7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SPG11Q96JI7 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SPG11Q96JI7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.18■■□□□ 1.14
SPG11Q96JI7 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPG11Q96JI7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SPG11Q96JI7 AC060814.1-201ENST00000554326 538 ntBASIC22.17■■□□□ 1.14
SPG11Q96JI7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPG11Q96JI7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SPG11Q96JI7 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC22.17■■□□□ 1.14
SPG11Q96JI7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.17■■□□□ 1.14
SPG11Q96JI7 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SPG11Q96JI7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
SPG11Q96JI7 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.16■■□□□ 1.14
SPG11Q96JI7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms