Protein–RNA interactions for Protein: Q96EY7

PTCD3, Pentatricopeptide repeat domain-containing protein 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 689 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3Q96EY7 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PTCD3Q96EY7 AL139393.2-201ENST00000608721 2025 ntBASIC25.66■■□□□ 1.7
PTCD3Q96EY7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCD3Q96EY7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
PTCD3Q96EY7 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PTCD3Q96EY7 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD3Q96EY7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD3Q96EY7 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD3Q96EY7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD3Q96EY7 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD3Q96EY7 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PTCD3Q96EY7 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
PTCD3Q96EY7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCD3Q96EY7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTCD3Q96EY7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
PTCD3Q96EY7 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
PTCD3Q96EY7 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD3Q96EY7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD3Q96EY7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
PTCD3Q96EY7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.61■■□□□ 1.69
PTCD3Q96EY7 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
PTCD3Q96EY7 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC25.6■■□□□ 1.69
PTCD3Q96EY7 DENR-202ENST00000455982 1052 ntTSL 5 BASIC25.6■■□□□ 1.69
PTCD3Q96EY7 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD3Q96EY7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD3Q96EY7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD3Q96EY7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC25.59■■□□□ 1.69
PTCD3Q96EY7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
PTCD3Q96EY7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.59■■□□□ 1.69
PTCD3Q96EY7 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
PTCD3Q96EY7 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD3Q96EY7 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
PTCD3Q96EY7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC25.57■■□□□ 1.68
PTCD3Q96EY7 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC25.57■■□□□ 1.68
PTCD3Q96EY7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD3Q96EY7 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
PTCD3Q96EY7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC25.56■■□□□ 1.68
PTCD3Q96EY7 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC25.56■■□□□ 1.68
PTCD3Q96EY7 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
PTCD3Q96EY7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC25.55■■□□□ 1.68
PTCD3Q96EY7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
PTCD3Q96EY7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC25.54■■□□□ 1.68
PTCD3Q96EY7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD3Q96EY7 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD3Q96EY7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD3Q96EY7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
PTCD3Q96EY7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.52■■□□□ 1.68
PTCD3Q96EY7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
PTCD3Q96EY7 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
PTCD3Q96EY7 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD3Q96EY7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
PTCD3Q96EY7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD3Q96EY7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC25.51■■□□□ 1.67
PTCD3Q96EY7 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
PTCD3Q96EY7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PTCD3Q96EY7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
PTCD3Q96EY7 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
PTCD3Q96EY7 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.5■■□□□ 1.67
PTCD3Q96EY7 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
PTCD3Q96EY7 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
PTCD3Q96EY7 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
PTCD3Q96EY7 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.49■■□□□ 1.67
PTCD3Q96EY7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.48■■□□□ 1.67
PTCD3Q96EY7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.48■■□□□ 1.67
PTCD3Q96EY7 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC25.47■■□□□ 1.67
PTCD3Q96EY7 SUZ12P1-203ENST00000578195 985 ntBASIC25.47■■□□□ 1.67
PTCD3Q96EY7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
PTCD3Q96EY7 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC25.47■■□□□ 1.67
PTCD3Q96EY7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC25.46■■□□□ 1.67
PTCD3Q96EY7 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCD3Q96EY7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCD3Q96EY7 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.46■■□□□ 1.67
PTCD3Q96EY7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.45■■□□□ 1.67
PTCD3Q96EY7 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC25.45■■□□□ 1.66
PTCD3Q96EY7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD3Q96EY7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD3Q96EY7 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD3Q96EY7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.44■■□□□ 1.66
PTCD3Q96EY7 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC25.44■■□□□ 1.66
PTCD3Q96EY7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC25.44■■□□□ 1.66
PTCD3Q96EY7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCD3Q96EY7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCD3Q96EY7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC25.42■■□□□ 1.66
PTCD3Q96EY7 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
PTCD3Q96EY7 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCD3Q96EY7 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
PTCD3Q96EY7 AC010864.1-201ENST00000609407 1511 ntBASIC25.41■■□□□ 1.66
PTCD3Q96EY7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
PTCD3Q96EY7 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
PTCD3Q96EY7 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
PTCD3Q96EY7 MIR762-201ENST00000390236 83 ntBASIC25.39■■□□□ 1.66
PTCD3Q96EY7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.39■■□□□ 1.65
PTCD3Q96EY7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.65
PTCD3Q96EY7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
PTCD3Q96EY7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC25.38■■□□□ 1.65
PTCD3Q96EY7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC25.38■■□□□ 1.65
PTCD3Q96EY7 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD3Q96EY7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD3Q96EY7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
PTCD3Q96EY7 CHML-205ENST00000638160 705 ntTSL 3 BASIC25.37■■□□□ 1.65
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms