Protein–RNA interactions for Protein: Q96D59

RNF183, Probable E3 ubiquitin-protein ligase RNF183, humanhuman

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF183Q96D59 AC135731.1-201ENST00000569415 2548 ntBASIC19.03■□□□□ 0.64
RNF183Q96D59 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RNF183Q96D59 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RNF183Q96D59 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.03■□□□□ 0.64
RNF183Q96D59 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RNF183Q96D59 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RNF183Q96D59 RNF166-209ENST00000567844 633 ntTSL 5 BASIC19.02■□□□□ 0.64
RNF183Q96D59 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RNF183Q96D59 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF183Q96D59 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF183Q96D59 DUX4L11-201ENST00000611504 1267 ntBASIC19.01■□□□□ 0.63
RNF183Q96D59 DUX4L12-201ENST00000614593 1267 ntBASIC19.01■□□□□ 0.63
RNF183Q96D59 DUX4L14-201ENST00000621227 1267 ntBASIC19.01■□□□□ 0.63
RNF183Q96D59 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF183Q96D59 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RNF183Q96D59 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF183Q96D59 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RNF183Q96D59 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
RNF183Q96D59 AGPS-202ENST00000409888 815 ntTSL 4 BASIC19■□□□□ 0.63
RNF183Q96D59 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19■□□□□ 0.63
RNF183Q96D59 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF183Q96D59 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
RNF183Q96D59 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF183Q96D59 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.99■□□□□ 0.63
RNF183Q96D59 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC18.99■□□□□ 0.63
RNF183Q96D59 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.99■□□□□ 0.63
RNF183Q96D59 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
RNF183Q96D59 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RNF183Q96D59 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF183Q96D59 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RNF183Q96D59 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF183Q96D59 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.97■□□□□ 0.63
RNF183Q96D59 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF183Q96D59 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RNF183Q96D59 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF183Q96D59 MIR3648-2-201ENST00000581792 180 ntBASIC18.96■□□□□ 0.63
RNF183Q96D59 MIR3648-1-201ENST00000615959 180 ntBASIC18.96■□□□□ 0.63
RNF183Q96D59 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF183Q96D59 GDI1-215ENST00000630693 786 ntTSL 4 BASIC18.95■□□□□ 0.62
RNF183Q96D59 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF183Q96D59 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
RNF183Q96D59 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF183Q96D59 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF183Q96D59 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF183Q96D59 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF183Q96D59 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
RNF183Q96D59 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF183Q96D59 MIR639-201ENST00000384974 98 ntBASIC18.93■□□□□ 0.62
RNF183Q96D59 AC016575.1-201ENST00000607026 382 ntBASIC18.93■□□□□ 0.62
RNF183Q96D59 AL135925.1-201ENST00000605920 1701 ntBASIC18.93■□□□□ 0.62
RNF183Q96D59 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF183Q96D59 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF183Q96D59 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC18.92■□□□□ 0.62
RNF183Q96D59 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF183Q96D59 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
RNF183Q96D59 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF183Q96D59 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF183Q96D59 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF183Q96D59 CR559946.2-201ENST00000623684 991 ntBASIC18.91■□□□□ 0.62
RNF183Q96D59 LINC00273-201ENST00000539813 1452 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF183Q96D59 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF183Q96D59 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF183Q96D59 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF183Q96D59 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L13-201ENST00000554103 1267 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L15-201ENST00000611059 1267 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L23-201ENST00000615195 1269 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L24-201ENST00000617576 1269 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L22-201ENST00000618238 1269 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L20-201ENST00000619712 1269 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L21-201ENST00000622058 1269 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L10-201ENST00000622460 1267 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 DUX4L25-201ENST00000624915 1269 ntBASIC18.9■□□□□ 0.62
RNF183Q96D59 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF183Q96D59 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.9■□□□□ 0.62
RNF183Q96D59 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF183Q96D59 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF183Q96D59 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF183Q96D59 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF183Q96D59 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF183Q96D59 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.88■□□□□ 0.61
RNF183Q96D59 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF183Q96D59 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.88■□□□□ 0.61
RNF183Q96D59 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
RNF183Q96D59 MIR4449-201ENST00000578365 66 ntBASIC18.87■□□□□ 0.61
RNF183Q96D59 CHML-204ENST00000638121 920 ntTSL 2 BASIC18.87■□□□□ 0.61
RNF183Q96D59 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF183Q96D59 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC18.86■□□□□ 0.61
RNF183Q96D59 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF183Q96D59 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
RNF183Q96D59 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.85■□□□□ 0.61
RNF183Q96D59 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF183Q96D59 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
RNF183Q96D59 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF183Q96D59 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF183Q96D59 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF183Q96D59 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
RNF183Q96D59 AC127502.1-201ENST00000399971 1502 ntBASIC18.84■□□□□ 0.61
RNF183Q96D59 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms