Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Chmp1aQ921W0 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1aQ921W0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1aQ921W0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1aQ921W0 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Chmp1aQ921W0 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1aQ921W0 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1aQ921W0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1aQ921W0 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1aQ921W0 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Chmp1aQ921W0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.87■□□□□ 0.93
Chmp1aQ921W0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp1aQ921W0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Chmp1aQ921W0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp1aQ921W0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Chmp1aQ921W0 Sowahd-201ENSMUST00000060057 1574 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Chmp1aQ921W0 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Chmp1aQ921W0 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1aQ921W0 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1aQ921W0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1aQ921W0 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Chmp1aQ921W0 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp1aQ921W0 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Chmp1aQ921W0 Gm8109-201ENSMUST00000194076 746 ntBASIC20.83■□□□□ 0.93
Chmp1aQ921W0 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Chmp1aQ921W0 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1aQ921W0 Gm26115-201ENSMUST00000175605 87 ntBASIC20.82■□□□□ 0.92
Chmp1aQ921W0 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1aQ921W0 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1aQ921W0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1aQ921W0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Chmp1aQ921W0 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp1aQ921W0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Chmp1aQ921W0 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1aQ921W0 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1aQ921W0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1aQ921W0 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1aQ921W0 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Chmp1aQ921W0 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Chmp1aQ921W0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC20.79■□□□□ 0.92
Chmp1aQ921W0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.79■□□□□ 0.92
Chmp1aQ921W0 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1aQ921W0 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1aQ921W0 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1aQ921W0 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1aQ921W0 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1aQ921W0 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Chmp1aQ921W0 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1aQ921W0 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Chmp1aQ921W0 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1aQ921W0 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Chmp1aQ921W0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Chmp1aQ921W0 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1aQ921W0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1aQ921W0 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Chmp1aQ921W0 AC122428.3-201ENSMUST00000215551 2290 ntBASIC20.73■□□□□ 0.91
Chmp1aQ921W0 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp1aQ921W0 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.72■□□□□ 0.91
Chmp1aQ921W0 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp1aQ921W0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Chmp1aQ921W0 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1aQ921W0 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1aQ921W0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Chmp1aQ921W0 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC20.71■□□□□ 0.91
Chmp1aQ921W0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Chmp1aQ921W0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp1aQ921W0 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Chmp1aQ921W0 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Chmp1aQ921W0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.69■□□□□ 0.9
Chmp1aQ921W0 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1aQ921W0 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1aQ921W0 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1aQ921W0 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Chmp1aQ921W0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Chmp1aQ921W0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp1aQ921W0 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Chmp1aQ921W0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1aQ921W0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Chmp1aQ921W0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.66■□□□□ 0.9
Chmp1aQ921W0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1aQ921W0 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1aQ921W0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1aQ921W0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Chmp1aQ921W0 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp1aQ921W0 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp1aQ921W0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp1aQ921W0 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Chmp1aQ921W0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC20.64■□□□□ 0.89
Chmp1aQ921W0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Chmp1aQ921W0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1aQ921W0 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1aQ921W0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1aQ921W0 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Chmp1aQ921W0 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Chmp1aQ921W0 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1aQ921W0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Chmp1aQ921W0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1aQ921W0 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1aQ921W0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Chmp1aQ921W0 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.4 ms