Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.25■■■□□ 2.11
Pcdhb22Q91XZ8 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.25■■■□□ 2.11
Pcdhb22Q91XZ8 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhb22Q91XZ8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Pcdhb22Q91XZ8 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.24■■■□□ 2.11
Pcdhb22Q91XZ8 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhb22Q91XZ8 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC28.22■■■□□ 2.11
Pcdhb22Q91XZ8 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.22■■■□□ 2.11
Pcdhb22Q91XZ8 Gm9939-201ENSMUST00000067161 1154 ntBASIC28.22■■■□□ 2.11
Pcdhb22Q91XZ8 Nkain2-201ENSMUST00000092602 558 ntBASIC28.22■■■□□ 2.11
Pcdhb22Q91XZ8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC28.22■■■□□ 2.11
Pcdhb22Q91XZ8 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
Pcdhb22Q91XZ8 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.21■■■□□ 2.11
Pcdhb22Q91XZ8 Gm30023-201ENSMUST00000197970 889 ntBASIC28.2■■■□□ 2.1
Pcdhb22Q91XZ8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
Pcdhb22Q91XZ8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb22Q91XZ8 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb22Q91XZ8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Pcdhb22Q91XZ8 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Pcdhb22Q91XZ8 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.17■■■□□ 2.1
Pcdhb22Q91XZ8 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC28.17■■■□□ 2.1
Pcdhb22Q91XZ8 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC28.16■■■□□ 2.1
Pcdhb22Q91XZ8 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Pcdhb22Q91XZ8 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhb22Q91XZ8 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Pcdhb22Q91XZ8 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pcdhb22Q91XZ8 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.14■■■□□ 2.09
Pcdhb22Q91XZ8 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pcdhb22Q91XZ8 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC28.12■■■□□ 2.09
Pcdhb22Q91XZ8 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Pcdhb22Q91XZ8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Pcdhb22Q91XZ8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhb22Q91XZ8 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Pcdhb22Q91XZ8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.09■■■□□ 2.09
Pcdhb22Q91XZ8 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC28.08■■■□□ 2.09
Pcdhb22Q91XZ8 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Pcdhb22Q91XZ8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.08■■■□□ 2.08
Pcdhb22Q91XZ8 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.07■■■□□ 2.08
Pcdhb22Q91XZ8 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Pcdhb22Q91XZ8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhb22Q91XZ8 Gm6821-201ENSMUST00000107540 542 ntBASIC28.06■■■□□ 2.08
Pcdhb22Q91XZ8 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhb22Q91XZ8 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhb22Q91XZ8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
Pcdhb22Q91XZ8 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdhb22Q91XZ8 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdhb22Q91XZ8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.04■■■□□ 2.08
Pcdhb22Q91XZ8 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pcdhb22Q91XZ8 Gm8503-201ENSMUST00000118131 455 ntBASIC28.03■■■□□ 2.08
Pcdhb22Q91XZ8 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC28.03■■■□□ 2.08
Pcdhb22Q91XZ8 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb22Q91XZ8 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Pcdhb22Q91XZ8 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb22Q91XZ8 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC28.02■■■□□ 2.08
Pcdhb22Q91XZ8 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pcdhb22Q91XZ8 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC27.99■■■□□ 2.07
Pcdhb22Q91XZ8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC27.99■■■□□ 2.07
Pcdhb22Q91XZ8 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhb22Q91XZ8 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.99■■■□□ 2.07
Pcdhb22Q91XZ8 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC27.98■■■□□ 2.07
Pcdhb22Q91XZ8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Pcdhb22Q91XZ8 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC27.97■■■□□ 2.07
Pcdhb22Q91XZ8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pcdhb22Q91XZ8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC27.97■■■□□ 2.07
Pcdhb22Q91XZ8 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.97■■■□□ 2.07
Pcdhb22Q91XZ8 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC27.96■■■□□ 2.07
Pcdhb22Q91XZ8 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.94■■■□□ 2.06
Pcdhb22Q91XZ8 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC27.94■■■□□ 2.06
Pcdhb22Q91XZ8 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Pcdhb22Q91XZ8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pcdhb22Q91XZ8 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC27.93■■■□□ 2.06
Pcdhb22Q91XZ8 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC27.93■■■□□ 2.06
Pcdhb22Q91XZ8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC27.93■■■□□ 2.06
Pcdhb22Q91XZ8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhb22Q91XZ8 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pcdhb22Q91XZ8 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdhb22Q91XZ8 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.91■■■□□ 2.06
Pcdhb22Q91XZ8 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Pcdhb22Q91XZ8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pcdhb22Q91XZ8 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC27.89■■■□□ 2.06
Pcdhb22Q91XZ8 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Pcdhb22Q91XZ8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC27.89■■■□□ 2.05
Pcdhb22Q91XZ8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdhb22Q91XZ8 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdhb22Q91XZ8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
Pcdhb22Q91XZ8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pcdhb22Q91XZ8 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Pcdhb22Q91XZ8 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC27.85■■■□□ 2.05
Pcdhb22Q91XZ8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Pcdhb22Q91XZ8 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.85■■■□□ 2.05
Pcdhb22Q91XZ8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhb22Q91XZ8 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhb22Q91XZ8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Pcdhb22Q91XZ8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pcdhb22Q91XZ8 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
Pcdhb22Q91XZ8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC27.83■■■□□ 2.04
Pcdhb22Q91XZ8 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC27.82■■■□□ 2.04
Pcdhb22Q91XZ8 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdhb22Q91XZ8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Pcdhb22Q91XZ8 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.81■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms