Protein–RNA interactions for Protein: Q91XX5

Pcdhgb5, Protocadherin gamma B5, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb5Q91XX5 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb5Q91XX5 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhgb5Q91XX5 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Pcdhgb5Q91XX5 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhgb5Q91XX5 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb5Q91XX5 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhgb5Q91XX5 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhgb5Q91XX5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.92■■□□□ 1.42
Pcdhgb5Q91XX5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb5Q91XX5 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC23.9■■□□□ 1.42
Pcdhgb5Q91XX5 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb5Q91XX5 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhgb5Q91XX5 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.89■■□□□ 1.42
Pcdhgb5Q91XX5 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhgb5Q91XX5 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhgb5Q91XX5 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC23.88■■□□□ 1.41
Pcdhgb5Q91XX5 Mir6538-201ENSMUST00000183713 110 ntBASIC23.88■■□□□ 1.41
Pcdhgb5Q91XX5 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb5Q91XX5 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb5Q91XX5 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb5Q91XX5 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb5Q91XX5 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhgb5Q91XX5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhgb5Q91XX5 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb5Q91XX5 Gm6311-201ENSMUST00000073790 878 ntBASIC23.85■■□□□ 1.41
Pcdhgb5Q91XX5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb5Q91XX5 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb5Q91XX5 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhgb5Q91XX5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb5Q91XX5 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhgb5Q91XX5 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhgb5Q91XX5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.83■■□□□ 1.41
Pcdhgb5Q91XX5 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb5Q91XX5 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhgb5Q91XX5 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb5Q91XX5 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb5Q91XX5 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb5Q91XX5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhgb5Q91XX5 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb5Q91XX5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhgb5Q91XX5 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhgb5Q91XX5 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhgb5Q91XX5 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhgb5Q91XX5 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
Pcdhgb5Q91XX5 B4galt7-202ENSMUST00000100764 2195 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb5Q91XX5 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdhgb5Q91XX5 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb5Q91XX5 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhgb5Q91XX5 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
Pcdhgb5Q91XX5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhgb5Q91XX5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdhgb5Q91XX5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdhgb5Q91XX5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhgb5Q91XX5 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
Pcdhgb5Q91XX5 Gm11175-201ENSMUST00000116172 543 ntBASIC23.74■■□□□ 1.39
Pcdhgb5Q91XX5 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Pcdhgb5Q91XX5 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC23.73■■□□□ 1.39
Pcdhgb5Q91XX5 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC23.72■■□□□ 1.39
Pcdhgb5Q91XX5 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
Pcdhgb5Q91XX5 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhgb5Q91XX5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Pcdhgb5Q91XX5 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb5Q91XX5 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC23.71■■□□□ 1.39
Pcdhgb5Q91XX5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Pcdhgb5Q91XX5 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.39
Pcdhgb5Q91XX5 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
Pcdhgb5Q91XX5 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb5Q91XX5 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb5Q91XX5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Pcdhgb5Q91XX5 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Pcdhgb5Q91XX5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb5Q91XX5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Pcdhgb5Q91XX5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
Pcdhgb5Q91XX5 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Pcdhgb5Q91XX5 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhgb5Q91XX5 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Pcdhgb5Q91XX5 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC23.64■■□□□ 1.37
Pcdhgb5Q91XX5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC23.64■■□□□ 1.37
Pcdhgb5Q91XX5 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Pcdhgb5Q91XX5 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhgb5Q91XX5 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdhgb5Q91XX5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.63■■□□□ 1.37
Pcdhgb5Q91XX5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb5Q91XX5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdhgb5Q91XX5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb5Q91XX5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Pcdhgb5Q91XX5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb5Q91XX5 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdhgb5Q91XX5 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Pcdhgb5Q91XX5 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdhgb5Q91XX5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
Pcdhgb5Q91XX5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb5Q91XX5 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb5Q91XX5 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb5Q91XX5 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdhgb5Q91XX5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC23.58■■□□□ 1.37
Pcdhgb5Q91XX5 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdhgb5Q91XX5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.58■■□□□ 1.37
Pcdhgb5Q91XX5 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdhgb5Q91XX5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Retrieved 100 of 76,532 protein–RNA pairs in 85.8 ms