Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cspg4Q8VHY0 Gm6345-201ENSMUST00000180378 1691 ntBASIC21.16■□□□□ 0.98
Cspg4Q8VHY0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg4Q8VHY0 Guf1-201ENSMUST00000031113 1769 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg4Q8VHY0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC21.15■□□□□ 0.98
Cspg4Q8VHY0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cspg4Q8VHY0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC21.14■□□□□ 0.97
Cspg4Q8VHY0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cspg4Q8VHY0 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg4Q8VHY0 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg4Q8VHY0 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC21.12■□□□□ 0.97
Cspg4Q8VHY0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg4Q8VHY0 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cspg4Q8VHY0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cspg4Q8VHY0 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cspg4Q8VHY0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cspg4Q8VHY0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cspg4Q8VHY0 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cspg4Q8VHY0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg4Q8VHY0 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cspg4Q8VHY0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Gm6658-202ENSMUST00000209493 1885 ntBASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cspg4Q8VHY0 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cspg4Q8VHY0 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.05■□□□□ 0.96
Cspg4Q8VHY0 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Cspg4Q8VHY0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cspg4Q8VHY0 Gm7332-201ENSMUST00000118351 454 ntBASIC21.04■□□□□ 0.96
Cspg4Q8VHY0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg4Q8VHY0 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg4Q8VHY0 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cspg4Q8VHY0 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC21.03■□□□□ 0.96
Cspg4Q8VHY0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cspg4Q8VHY0 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cspg4Q8VHY0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cspg4Q8VHY0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Cspg4Q8VHY0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cspg4Q8VHY0 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cspg4Q8VHY0 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cspg4Q8VHY0 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cspg4Q8VHY0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg4Q8VHY0 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg4Q8VHY0 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC20.99■□□□□ 0.95
Cspg4Q8VHY0 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cspg4Q8VHY0 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Cspg4Q8VHY0 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cspg4Q8VHY0 Particl-201ENSMUST00000205370 1560 ntBASIC20.97■□□□□ 0.95
Cspg4Q8VHY0 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg4Q8VHY0 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg4Q8VHY0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg4Q8VHY0 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cspg4Q8VHY0 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
Cspg4Q8VHY0 Gm15546-201ENSMUST00000122095 826 ntBASIC20.95■□□□□ 0.94
Cspg4Q8VHY0 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cspg4Q8VHY0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cspg4Q8VHY0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.94■□□□□ 0.94
Cspg4Q8VHY0 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cspg4Q8VHY0 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.93■□□□□ 0.94
Cspg4Q8VHY0 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg4Q8VHY0 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.92■□□□□ 0.94
Cspg4Q8VHY0 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC20.91■□□□□ 0.94
Cspg4Q8VHY0 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.91■□□□□ 0.94
Cspg4Q8VHY0 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg4Q8VHY0 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg4Q8VHY0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Gm4799-201ENSMUST00000095396 657 ntBASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg4Q8VHY0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cspg4Q8VHY0 Gm11687-201ENSMUST00000118911 886 ntBASIC20.89■□□□□ 0.93
Cspg4Q8VHY0 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.88■□□□□ 0.93
Cspg4Q8VHY0 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Cspg4Q8VHY0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg4Q8VHY0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.84■□□□□ 0.93
Cspg4Q8VHY0 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg4Q8VHY0 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg4Q8VHY0 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.83■□□□□ 0.92
Cspg4Q8VHY0 Gm16437-201ENSMUST00000025669 507 ntBASIC20.83■□□□□ 0.92
Cspg4Q8VHY0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Cspg4Q8VHY0 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms