Protein–RNA interactions for Protein: Q8TEJ3

SH3RF3, SH3 domain-containing RING finger protein 3, humanhuman

Predicted RBP Predictions only

Length 882 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF3Q8TEJ3 DUX4L23-201ENST00000615195 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L24-201ENST00000617576 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L22-201ENST00000618238 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L20-201ENST00000619712 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L21-201ENST00000622058 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L10-201ENST00000622460 1267 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DUX4L25-201ENST00000624915 1269 ntBASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC31.25■■■□□ 2.59
SH3RF3Q8TEJ3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 LINC00273-201ENST00000539813 1452 ntBASIC31.24■■■□□ 2.59
SH3RF3Q8TEJ3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.23■■■□□ 2.59
SH3RF3Q8TEJ3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
SH3RF3Q8TEJ3 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
SH3RF3Q8TEJ3 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.21■■■□□ 2.59
SH3RF3Q8TEJ3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
SH3RF3Q8TEJ3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC31.2■■■□□ 2.59
SH3RF3Q8TEJ3 CHML-204ENST00000638121 920 ntTSL 2 BASIC31.2■■■□□ 2.59
SH3RF3Q8TEJ3 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.19■■■□□ 2.58
SH3RF3Q8TEJ3 AC127502.1-201ENST00000399971 1502 ntBASIC31.19■■■□□ 2.58
SH3RF3Q8TEJ3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.18■■■□□ 2.58
SH3RF3Q8TEJ3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.18■■■□□ 2.58
SH3RF3Q8TEJ3 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC31.17■■■□□ 2.58
SH3RF3Q8TEJ3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
SH3RF3Q8TEJ3 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
SH3RF3Q8TEJ3 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC31.15■■■□□ 2.58
SH3RF3Q8TEJ3 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.14■■■□□ 2.58
SH3RF3Q8TEJ3 HES6-205ENST00000409356 528 ntTSL 2 BASIC31.13■■■□□ 2.57
SH3RF3Q8TEJ3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
SH3RF3Q8TEJ3 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
SH3RF3Q8TEJ3 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC31.1■■■□□ 2.57
SH3RF3Q8TEJ3 METRNL-202ENST00000570778 967 ntTSL 5 BASIC31.1■■■□□ 2.57
SH3RF3Q8TEJ3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.09■■■□□ 2.57
SH3RF3Q8TEJ3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
SH3RF3Q8TEJ3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.09■■■□□ 2.57
SH3RF3Q8TEJ3 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
SH3RF3Q8TEJ3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.06■■■□□ 2.56
SH3RF3Q8TEJ3 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC31.05■■■□□ 2.56
SH3RF3Q8TEJ3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH3RF3Q8TEJ3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH3RF3Q8TEJ3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SH3RF3Q8TEJ3 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 WHAMMP2-203ENST00000563942 1603 ntBASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
SH3RF3Q8TEJ3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.56
SH3RF3Q8TEJ3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.01■■■□□ 2.55
SH3RF3Q8TEJ3 AC135983.2-203ENST00000454486 1613 ntBASIC31.01■■■□□ 2.55
SH3RF3Q8TEJ3 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31■■■□□ 2.55
SH3RF3Q8TEJ3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
SH3RF3Q8TEJ3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31■■■□□ 2.55
SH3RF3Q8TEJ3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC30.99■■■□□ 2.55
SH3RF3Q8TEJ3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
SH3RF3Q8TEJ3 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
SH3RF3Q8TEJ3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.97■■■□□ 2.55
SH3RF3Q8TEJ3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC30.97■■■□□ 2.55
SH3RF3Q8TEJ3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC30.96■■■□□ 2.55
SH3RF3Q8TEJ3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.96■■■□□ 2.55
SH3RF3Q8TEJ3 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC30.95■■■□□ 2.55
SH3RF3Q8TEJ3 ST7-AS1-201ENST00000456775 1889 ntBASIC30.95■■■□□ 2.54
SH3RF3Q8TEJ3 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.54
SH3RF3Q8TEJ3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.94■■■□□ 2.54
SH3RF3Q8TEJ3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH3RF3Q8TEJ3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
SH3RF3Q8TEJ3 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SH3RF3Q8TEJ3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.93■■■□□ 2.54
SH3RF3Q8TEJ3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
SH3RF3Q8TEJ3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3RF3Q8TEJ3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC30.92■■■□□ 2.54
SH3RF3Q8TEJ3 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
SH3RF3Q8TEJ3 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
SH3RF3Q8TEJ3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
SH3RF3Q8TEJ3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC30.9■■■□□ 2.54
SH3RF3Q8TEJ3 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
SH3RF3Q8TEJ3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
SH3RF3Q8TEJ3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC30.86■■■□□ 2.53
SH3RF3Q8TEJ3 HSD17B1P1-201ENST00000590052 955 ntBASIC30.86■■■□□ 2.53
SH3RF3Q8TEJ3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
SH3RF3Q8TEJ3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC30.85■■■□□ 2.53
SH3RF3Q8TEJ3 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms