Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
CHD5Q8TDI0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.6■■□□□ 1.85
CHD5Q8TDI0 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
CHD5Q8TDI0 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.59■■□□□ 1.85
CHD5Q8TDI0 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD5Q8TDI0 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.59■■□□□ 1.85
CHD5Q8TDI0 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.59■■□□□ 1.85
CHD5Q8TDI0 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD5Q8TDI0 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD5Q8TDI0 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD5Q8TDI0 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.58■■□□□ 1.84
CHD5Q8TDI0 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD5Q8TDI0 DUX4L29-201ENST00000425409 679 ntBASIC26.56■■□□□ 1.84
CHD5Q8TDI0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD5Q8TDI0 AC021231.2-201ENST00000594613 730 ntBASIC26.55■■□□□ 1.84
CHD5Q8TDI0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.54■■□□□ 1.84
CHD5Q8TDI0 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD5Q8TDI0 AC135983.2-203ENST00000454486 1613 ntBASIC26.54■■□□□ 1.84
CHD5Q8TDI0 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHD5Q8TDI0 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHD5Q8TDI0 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CHD5Q8TDI0 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
CHD5Q8TDI0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.52■■□□□ 1.84
CHD5Q8TDI0 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.52■■□□□ 1.84
CHD5Q8TDI0 AC127502.1-201ENST00000399971 1502 ntBASIC26.52■■□□□ 1.84
CHD5Q8TDI0 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
CHD5Q8TDI0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHD5Q8TDI0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.52■■□□□ 1.84
CHD5Q8TDI0 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD5Q8TDI0 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
CHD5Q8TDI0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHD5Q8TDI0 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHD5Q8TDI0 ABHD17AP4-201ENST00000411545 909 ntBASIC26.5■■□□□ 1.83
CHD5Q8TDI0 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.5■■□□□ 1.83
CHD5Q8TDI0 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHD5Q8TDI0 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
CHD5Q8TDI0 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD5Q8TDI0 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.49■■□□□ 1.83
CHD5Q8TDI0 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
CHD5Q8TDI0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD5Q8TDI0 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CHD5Q8TDI0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
CHD5Q8TDI0 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
CHD5Q8TDI0 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD5Q8TDI0 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD5Q8TDI0 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHD5Q8TDI0 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
CHD5Q8TDI0 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD5Q8TDI0 WHAMMP2-203ENST00000563942 1603 ntBASIC26.44■■□□□ 1.82
CHD5Q8TDI0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD5Q8TDI0 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHD5Q8TDI0 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.43■■□□□ 1.82
CHD5Q8TDI0 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.43■■□□□ 1.82
CHD5Q8TDI0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.42■■□□□ 1.82
CHD5Q8TDI0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CHD5Q8TDI0 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.81
CHD5Q8TDI0 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.38■■□□□ 1.81
CHD5Q8TDI0 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.38■■□□□ 1.81
CHD5Q8TDI0 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHD5Q8TDI0 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHD5Q8TDI0 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC26.37■■□□□ 1.81
CHD5Q8TDI0 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD5Q8TDI0 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHD5Q8TDI0 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.36■■□□□ 1.81
CHD5Q8TDI0 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
CHD5Q8TDI0 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
CHD5Q8TDI0 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.36■■□□□ 1.81
CHD5Q8TDI0 AL139393.2-201ENST00000608721 2025 ntBASIC26.36■■□□□ 1.81
CHD5Q8TDI0 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD5Q8TDI0 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
CHD5Q8TDI0 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC26.35■■□□□ 1.81
CHD5Q8TDI0 LINC01971-201ENST00000617888 1048 ntBASIC26.35■■□□□ 1.81
CHD5Q8TDI0 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CHD5Q8TDI0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD5Q8TDI0 ABCB10P3-201ENST00000561950 2166 ntBASIC26.34■■□□□ 1.81
CHD5Q8TDI0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHD5Q8TDI0 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD5Q8TDI0 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD5Q8TDI0 MIR7108-201ENST00000614319 87 ntBASIC26.33■■□□□ 1.81
CHD5Q8TDI0 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHD5Q8TDI0 ZNRF2P2-203ENST00000454624 420 ntBASIC26.33■■□□□ 1.8
CHD5Q8TDI0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC26.32■■□□□ 1.8
CHD5Q8TDI0 AP004833.2-201ENST00000532228 1454 ntBASIC26.31■■□□□ 1.8
CHD5Q8TDI0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC26.31■■□□□ 1.8
CHD5Q8TDI0 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD5Q8TDI0 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC26.31■■□□□ 1.8
CHD5Q8TDI0 CR559946.2-201ENST00000623684 991 ntBASIC26.31■■□□□ 1.8
CHD5Q8TDI0 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.31■■□□□ 1.8
CHD5Q8TDI0 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHD5Q8TDI0 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD5Q8TDI0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
CHD5Q8TDI0 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.29■■□□□ 1.8
CHD5Q8TDI0 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.29■■□□□ 1.8
CHD5Q8TDI0 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.29■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms