Protein–RNA interactions for Protein: Q8TBE1

CNIH3, Protein cornichon homolog 3, humanhuman

Predictions only

Length 160 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH3Q8TBE1 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
CNIH3Q8TBE1 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CNIH3Q8TBE1 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
CNIH3Q8TBE1 DYNLL1-208ENST00000550178 581 ntBASIC23.67■■□□□ 1.38
CNIH3Q8TBE1 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
CNIH3Q8TBE1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNIH3Q8TBE1 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
CNIH3Q8TBE1 BX255925.1-201ENST00000566954 1854 ntBASIC23.66■■□□□ 1.38
CNIH3Q8TBE1 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
CNIH3Q8TBE1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNIH3Q8TBE1 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
CNIH3Q8TBE1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNIH3Q8TBE1 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.65■■□□□ 1.38
CNIH3Q8TBE1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.65■■□□□ 1.38
CNIH3Q8TBE1 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
CNIH3Q8TBE1 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.38
CNIH3Q8TBE1 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
CNIH3Q8TBE1 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
CNIH3Q8TBE1 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC23.64■■□□□ 1.37
CNIH3Q8TBE1 CATIP-201ENST00000289388 1323 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNIH3Q8TBE1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNIH3Q8TBE1 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
CNIH3Q8TBE1 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC23.61■■□□□ 1.37
CNIH3Q8TBE1 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.61■■□□□ 1.37
CNIH3Q8TBE1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.6■■□□□ 1.37
CNIH3Q8TBE1 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH3Q8TBE1 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
CNIH3Q8TBE1 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
CNIH3Q8TBE1 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC23.58■■□□□ 1.37
CNIH3Q8TBE1 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.58■■□□□ 1.37
CNIH3Q8TBE1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
CNIH3Q8TBE1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.58■■□□□ 1.36
CNIH3Q8TBE1 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
CNIH3Q8TBE1 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH3Q8TBE1 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH3Q8TBE1 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
CNIH3Q8TBE1 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC23.56■■□□□ 1.36
CNIH3Q8TBE1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
CNIH3Q8TBE1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.55■■□□□ 1.36
CNIH3Q8TBE1 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.54■■□□□ 1.36
CNIH3Q8TBE1 AL449106.1-201ENST00000608517 1980 ntBASIC23.54■■□□□ 1.36
CNIH3Q8TBE1 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CNIH3Q8TBE1 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.54■■□□□ 1.36
CNIH3Q8TBE1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.54■■□□□ 1.36
CNIH3Q8TBE1 AC010864.1-201ENST00000609407 1511 ntBASIC23.54■■□□□ 1.36
CNIH3Q8TBE1 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CNIH3Q8TBE1 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC23.53■■□□□ 1.36
CNIH3Q8TBE1 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.53■■□□□ 1.36
CNIH3Q8TBE1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CNIH3Q8TBE1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.52■■□□□ 1.36
CNIH3Q8TBE1 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC23.52■■□□□ 1.36
CNIH3Q8TBE1 AL031258.1-201ENST00000623562 325 ntBASIC23.52■■□□□ 1.36
CNIH3Q8TBE1 SHF-208ENST00000560734 1731 ntTSL 3 BASIC23.52■■□□□ 1.36
CNIH3Q8TBE1 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CNIH3Q8TBE1 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.52■■□□□ 1.36
CNIH3Q8TBE1 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.51■■□□□ 1.35
CNIH3Q8TBE1 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC23.51■■□□□ 1.35
CNIH3Q8TBE1 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNIH3Q8TBE1 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CNIH3Q8TBE1 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.49■■□□□ 1.35
CNIH3Q8TBE1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.49■■□□□ 1.35
CNIH3Q8TBE1 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CNIH3Q8TBE1 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CNIH3Q8TBE1 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.48■■□□□ 1.35
CNIH3Q8TBE1 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
CNIH3Q8TBE1 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
CNIH3Q8TBE1 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
CNIH3Q8TBE1 WASH5P-204ENST00000632292 975 ntBASIC23.46■■□□□ 1.35
CNIH3Q8TBE1 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC23.45■■□□□ 1.35
CNIH3Q8TBE1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.45■■□□□ 1.34
CNIH3Q8TBE1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
CNIH3Q8TBE1 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.45■■□□□ 1.34
CNIH3Q8TBE1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
CNIH3Q8TBE1 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
CNIH3Q8TBE1 LINC01003-201ENST00000564834 1764 ntBASIC23.44■■□□□ 1.34
CNIH3Q8TBE1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Retrieved 100 of 98,524 protein–RNA pairs in 8.8 ms