Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC30.52■■■□□ 2.48
SMARCC2Q8TAQ2 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC30.52■■■□□ 2.48
SMARCC2Q8TAQ2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
SMARCC2Q8TAQ2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.5■■■□□ 2.47
SMARCC2Q8TAQ2 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC30.5■■■□□ 2.47
SMARCC2Q8TAQ2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC2Q8TAQ2 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC2Q8TAQ2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.5■■■□□ 2.47
SMARCC2Q8TAQ2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SMARCC2Q8TAQ2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCC2Q8TAQ2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCC2Q8TAQ2 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
SMARCC2Q8TAQ2 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCC2Q8TAQ2 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCC2Q8TAQ2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
SMARCC2Q8TAQ2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.47■■■□□ 2.47
SMARCC2Q8TAQ2 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC30.47■■■□□ 2.47
SMARCC2Q8TAQ2 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC30.46■■■□□ 2.47
SMARCC2Q8TAQ2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SMARCC2Q8TAQ2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
SMARCC2Q8TAQ2 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCC2Q8TAQ2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SMARCC2Q8TAQ2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCC2Q8TAQ2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.41■■■□□ 2.46
SMARCC2Q8TAQ2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
SMARCC2Q8TAQ2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC30.41■■■□□ 2.46
SMARCC2Q8TAQ2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC30.4■■■□□ 2.46
SMARCC2Q8TAQ2 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC30.4■■■□□ 2.46
SMARCC2Q8TAQ2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.4■■■□□ 2.46
SMARCC2Q8TAQ2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCC2Q8TAQ2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
SMARCC2Q8TAQ2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SMARCC2Q8TAQ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCC2Q8TAQ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCC2Q8TAQ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC30.35■■■□□ 2.45
SMARCC2Q8TAQ2 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SMARCC2Q8TAQ2 AC108673.1-201ENST00000510422 1159 ntBASIC30.34■■■□□ 2.45
SMARCC2Q8TAQ2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
SMARCC2Q8TAQ2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.33■■■□□ 2.45
SMARCC2Q8TAQ2 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
SMARCC2Q8TAQ2 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
SMARCC2Q8TAQ2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC2Q8TAQ2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC30.31■■■□□ 2.44
SMARCC2Q8TAQ2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.31■■■□□ 2.44
SMARCC2Q8TAQ2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC30.3■■■□□ 2.44
SMARCC2Q8TAQ2 MLEC-202ENST00000412616 841 ntTSL 3 BASIC30.29■■■□□ 2.44
SMARCC2Q8TAQ2 MIR6090-201ENST00000622481 60 ntBASIC30.29■■■□□ 2.44
SMARCC2Q8TAQ2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC30.28■■■□□ 2.44
SMARCC2Q8TAQ2 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCC2Q8TAQ2 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCC2Q8TAQ2 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
SMARCC2Q8TAQ2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.27■■■□□ 2.44
SMARCC2Q8TAQ2 AC127502.1-201ENST00000399971 1502 ntBASIC30.27■■■□□ 2.44
SMARCC2Q8TAQ2 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.26■■■□□ 2.44
SMARCC2Q8TAQ2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.26■■■□□ 2.43
SMARCC2Q8TAQ2 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 DRD5P2-201ENST00000421395 2012 ntBASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 AC142086.6-201ENST00000621154 1765 ntBASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC30.25■■■□□ 2.43
SMARCC2Q8TAQ2 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCC2Q8TAQ2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.24■■■□□ 2.43
SMARCC2Q8TAQ2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCC2Q8TAQ2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
SMARCC2Q8TAQ2 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.23■■■□□ 2.43
SMARCC2Q8TAQ2 ABHD17AP4-201ENST00000411545 909 ntBASIC30.23■■■□□ 2.43
SMARCC2Q8TAQ2 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.23■■■□□ 2.43
SMARCC2Q8TAQ2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.22■■■□□ 2.43
SMARCC2Q8TAQ2 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC30.21■■■□□ 2.43
SMARCC2Q8TAQ2 AP004833.2-201ENST00000532228 1454 ntBASIC30.21■■■□□ 2.43
SMARCC2Q8TAQ2 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.21■■■□□ 2.43
SMARCC2Q8TAQ2 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC30.21■■■□□ 2.43
SMARCC2Q8TAQ2 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC30.21■■■□□ 2.43
SMARCC2Q8TAQ2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC30.2■■■□□ 2.43
SMARCC2Q8TAQ2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.2■■■□□ 2.43
SMARCC2Q8TAQ2 DUX4L29-201ENST00000425409 679 ntBASIC30.19■■■□□ 2.42
SMARCC2Q8TAQ2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.19■■■□□ 2.42
SMARCC2Q8TAQ2 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMARCC2Q8TAQ2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMARCC2Q8TAQ2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.18■■■□□ 2.42
SMARCC2Q8TAQ2 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
SMARCC2Q8TAQ2 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
SMARCC2Q8TAQ2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
SMARCC2Q8TAQ2 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
SMARCC2Q8TAQ2 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.16■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms