Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC28.74■■■□□ 2.19
Top1mtQ8R4U6 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC28.73■■■□□ 2.19
Top1mtQ8R4U6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
Top1mtQ8R4U6 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC28.71■■■□□ 2.19
Top1mtQ8R4U6 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Top1mtQ8R4U6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
Top1mtQ8R4U6 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
Top1mtQ8R4U6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
Top1mtQ8R4U6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
Top1mtQ8R4U6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC28.68■■■□□ 2.18
Top1mtQ8R4U6 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Top1mtQ8R4U6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
Top1mtQ8R4U6 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
Top1mtQ8R4U6 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
Top1mtQ8R4U6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC28.66■■■□□ 2.18
Top1mtQ8R4U6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC28.65■■■□□ 2.18
Top1mtQ8R4U6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
Top1mtQ8R4U6 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
Top1mtQ8R4U6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
Top1mtQ8R4U6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC28.63■■■□□ 2.17
Top1mtQ8R4U6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
Top1mtQ8R4U6 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC28.61■■■□□ 2.17
Top1mtQ8R4U6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Gm30023-201ENSMUST00000197970 889 ntBASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
Top1mtQ8R4U6 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC28.58■■■□□ 2.16
Top1mtQ8R4U6 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC28.57■■■□□ 2.16
Top1mtQ8R4U6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
Top1mtQ8R4U6 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
Top1mtQ8R4U6 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Top1mtQ8R4U6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Top1mtQ8R4U6 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Top1mtQ8R4U6 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
Top1mtQ8R4U6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
Top1mtQ8R4U6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
Top1mtQ8R4U6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Top1mtQ8R4U6 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC28.5■■■□□ 2.15
Top1mtQ8R4U6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
Top1mtQ8R4U6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.48■■■□□ 2.15
Top1mtQ8R4U6 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Top1mtQ8R4U6 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Top1mtQ8R4U6 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC28.44■■■□□ 2.14
Top1mtQ8R4U6 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Top1mtQ8R4U6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.44■■■□□ 2.14
Top1mtQ8R4U6 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
Top1mtQ8R4U6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Top1mtQ8R4U6 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.42■■■□□ 2.14
Top1mtQ8R4U6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC28.41■■■□□ 2.14
Top1mtQ8R4U6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
Top1mtQ8R4U6 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC28.39■■■□□ 2.14
Top1mtQ8R4U6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC28.39■■■□□ 2.14
Top1mtQ8R4U6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC28.39■■■□□ 2.14
Top1mtQ8R4U6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.39■■■□□ 2.13
Top1mtQ8R4U6 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC28.38■■■□□ 2.13
Top1mtQ8R4U6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.38■■■□□ 2.13
Top1mtQ8R4U6 Nkain2-201ENSMUST00000092602 558 ntBASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
Top1mtQ8R4U6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
Top1mtQ8R4U6 Gm42809-201ENSMUST00000198429 1138 ntBASIC28.36■■■□□ 2.13
Top1mtQ8R4U6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC28.35■■■□□ 2.13
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms