Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC28.04■■■□□ 2.08
Pdlim2Q8R1G6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pdlim2Q8R1G6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
Pdlim2Q8R1G6 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Pdlim2Q8R1G6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pdlim2Q8R1G6 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC28.02■■■□□ 2.08
Pdlim2Q8R1G6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pdlim2Q8R1G6 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC28.02■■■□□ 2.08
Pdlim2Q8R1G6 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pdlim2Q8R1G6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
Pdlim2Q8R1G6 Pcf11-205ENSMUST00000208255 1720 ntBASIC28.01■■■□□ 2.07
Pdlim2Q8R1G6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Pdlim2Q8R1G6 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Pdlim2Q8R1G6 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Pdlim2Q8R1G6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pdlim2Q8R1G6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pdlim2Q8R1G6 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Pdlim2Q8R1G6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Pdlim2Q8R1G6 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC27.98■■■□□ 2.07
Pdlim2Q8R1G6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pdlim2Q8R1G6 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC27.97■■■□□ 2.07
Pdlim2Q8R1G6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC27.97■■■□□ 2.07
Pdlim2Q8R1G6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Pdlim2Q8R1G6 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pdlim2Q8R1G6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.96■■■□□ 2.07
Pdlim2Q8R1G6 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC27.96■■■□□ 2.07
Pdlim2Q8R1G6 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pdlim2Q8R1G6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Pdlim2Q8R1G6 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pdlim2Q8R1G6 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pdlim2Q8R1G6 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Pdlim2Q8R1G6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pdlim2Q8R1G6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Pdlim2Q8R1G6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Pdlim2Q8R1G6 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pdlim2Q8R1G6 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Pdlim2Q8R1G6 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Pdlim2Q8R1G6 Gm20634-201ENSMUST00000090779 2956 ntBASIC27.91■■■□□ 2.06
Pdlim2Q8R1G6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Pdlim2Q8R1G6 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.9■■■□□ 2.06
Pdlim2Q8R1G6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Pdlim2Q8R1G6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC27.88■■■□□ 2.05
Pdlim2Q8R1G6 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pdlim2Q8R1G6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Pdlim2Q8R1G6 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pdlim2Q8R1G6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC27.86■■■□□ 2.05
Pdlim2Q8R1G6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC27.85■■■□□ 2.05
Pdlim2Q8R1G6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Pdlim2Q8R1G6 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Pdlim2Q8R1G6 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC27.84■■■□□ 2.05
Pdlim2Q8R1G6 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC27.83■■■□□ 2.05
Pdlim2Q8R1G6 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC27.82■■■□□ 2.04
Pdlim2Q8R1G6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Pdlim2Q8R1G6 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC27.82■■■□□ 2.04
Pdlim2Q8R1G6 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC27.82■■■□□ 2.04
Pdlim2Q8R1G6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Pdlim2Q8R1G6 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Pdlim2Q8R1G6 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC27.81■■■□□ 2.04
Pdlim2Q8R1G6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.8■■■□□ 2.04
Pdlim2Q8R1G6 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC27.8■■■□□ 2.04
Pdlim2Q8R1G6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC27.79■■■□□ 2.04
Pdlim2Q8R1G6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Pdlim2Q8R1G6 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Pdlim2Q8R1G6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Pdlim2Q8R1G6 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC27.78■■■□□ 2.04
Pdlim2Q8R1G6 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
Pdlim2Q8R1G6 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC27.78■■■□□ 2.04
Pdlim2Q8R1G6 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
Pdlim2Q8R1G6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pdlim2Q8R1G6 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pdlim2Q8R1G6 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC27.77■■■□□ 2.04
Pdlim2Q8R1G6 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC27.77■■■□□ 2.04
Pdlim2Q8R1G6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.04
Pdlim2Q8R1G6 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC27.76■■■□□ 2.03
Pdlim2Q8R1G6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC27.76■■■□□ 2.03
Pdlim2Q8R1G6 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Pdlim2Q8R1G6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC27.75■■■□□ 2.03
Pdlim2Q8R1G6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC27.74■■■□□ 2.03
Pdlim2Q8R1G6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
Pdlim2Q8R1G6 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pdlim2Q8R1G6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC27.73■■■□□ 2.03
Pdlim2Q8R1G6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Pdlim2Q8R1G6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
Pdlim2Q8R1G6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC27.71■■■□□ 2.03
Pdlim2Q8R1G6 Gm7334-201ENSMUST00000061681 1356 ntAPPRIS P1 BASIC27.7■■■□□ 2.02
Pdlim2Q8R1G6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pdlim2Q8R1G6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pdlim2Q8R1G6 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC27.69■■■□□ 2.02
Pdlim2Q8R1G6 Kctd5-201ENSMUST00000017090 2443 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Pdlim2Q8R1G6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pdlim2Q8R1G6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC27.68■■■□□ 2.02
Pdlim2Q8R1G6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
Pdlim2Q8R1G6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pdlim2Q8R1G6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Pdlim2Q8R1G6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Pdlim2Q8R1G6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pdlim2Q8R1G6 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC27.66■■■□□ 2.02
Pdlim2Q8R1G6 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Pdlim2Q8R1G6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Pdlim2Q8R1G6 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.64■■■□□ 2.02
Retrieved 100 of 76,532 protein–RNA pairs in 148.5 ms