Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.39■■□□□ 1.49
SIMC1Q8NDZ2 MIR6090-201ENST00000622481 60 ntBASIC24.39■■□□□ 1.49
SIMC1Q8NDZ2 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.38■■□□□ 1.49
SIMC1Q8NDZ2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
SIMC1Q8NDZ2 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SIMC1Q8NDZ2 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.37■■□□□ 1.49
SIMC1Q8NDZ2 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
SIMC1Q8NDZ2 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.37■■□□□ 1.49
SIMC1Q8NDZ2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
SIMC1Q8NDZ2 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SIMC1Q8NDZ2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
SIMC1Q8NDZ2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
SIMC1Q8NDZ2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.35■■□□□ 1.49
SIMC1Q8NDZ2 SHF-206ENST00000560471 2499 ntTSL 5 BASIC24.35■■□□□ 1.49
SIMC1Q8NDZ2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.35■■□□□ 1.49
SIMC1Q8NDZ2 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC24.35■■□□□ 1.49
SIMC1Q8NDZ2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.34■■□□□ 1.49
SIMC1Q8NDZ2 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
SIMC1Q8NDZ2 AL139393.2-201ENST00000608721 2025 ntBASIC24.34■■□□□ 1.49
SIMC1Q8NDZ2 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC24.34■■□□□ 1.49
SIMC1Q8NDZ2 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC24.34■■□□□ 1.49
SIMC1Q8NDZ2 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
SIMC1Q8NDZ2 AC127502.1-201ENST00000399971 1502 ntBASIC24.33■■□□□ 1.49
SIMC1Q8NDZ2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC24.33■■□□□ 1.49
SIMC1Q8NDZ2 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SIMC1Q8NDZ2 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
SIMC1Q8NDZ2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.31■■□□□ 1.48
SIMC1Q8NDZ2 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
SIMC1Q8NDZ2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
SIMC1Q8NDZ2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.29■■□□□ 1.48
SIMC1Q8NDZ2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC24.29■■□□□ 1.48
SIMC1Q8NDZ2 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
SIMC1Q8NDZ2 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.28■■□□□ 1.48
SIMC1Q8NDZ2 AC108673.1-201ENST00000510422 1159 ntBASIC24.28■■□□□ 1.48
SIMC1Q8NDZ2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SIMC1Q8NDZ2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
SIMC1Q8NDZ2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC24.27■■□□□ 1.48
SIMC1Q8NDZ2 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.26■■□□□ 1.47
SIMC1Q8NDZ2 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC24.26■■□□□ 1.47
SIMC1Q8NDZ2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
SIMC1Q8NDZ2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
SIMC1Q8NDZ2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.24■■□□□ 1.47
SIMC1Q8NDZ2 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC24.24■■□□□ 1.47
SIMC1Q8NDZ2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
SIMC1Q8NDZ2 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC24.24■■□□□ 1.47
SIMC1Q8NDZ2 AC044849.2-201ENST00000606596 710 ntBASIC24.23■■□□□ 1.47
SIMC1Q8NDZ2 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SIMC1Q8NDZ2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.22■■□□□ 1.47
SIMC1Q8NDZ2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIMC1Q8NDZ2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIMC1Q8NDZ2 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SIMC1Q8NDZ2 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
SIMC1Q8NDZ2 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
SIMC1Q8NDZ2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.2■■□□□ 1.46
SIMC1Q8NDZ2 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
SIMC1Q8NDZ2 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SIMC1Q8NDZ2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
SIMC1Q8NDZ2 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.2■■□□□ 1.46
SIMC1Q8NDZ2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.19■■□□□ 1.46
SIMC1Q8NDZ2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SIMC1Q8NDZ2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SIMC1Q8NDZ2 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SIMC1Q8NDZ2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.18■■□□□ 1.46
SIMC1Q8NDZ2 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC24.17■■□□□ 1.46
SIMC1Q8NDZ2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SIMC1Q8NDZ2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.16■■□□□ 1.46
SIMC1Q8NDZ2 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SIMC1Q8NDZ2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SIMC1Q8NDZ2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC24.16■■□□□ 1.46
SIMC1Q8NDZ2 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SIMC1Q8NDZ2 BOD1-206ENST00000480951 814 ntTSL 2 BASIC24.14■■□□□ 1.45
SIMC1Q8NDZ2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.14■■□□□ 1.45
SIMC1Q8NDZ2 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SIMC1Q8NDZ2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SIMC1Q8NDZ2 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.13■■□□□ 1.45
SIMC1Q8NDZ2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SIMC1Q8NDZ2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.13■■□□□ 1.45
SIMC1Q8NDZ2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SIMC1Q8NDZ2 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC24.12■■□□□ 1.45
SIMC1Q8NDZ2 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
SIMC1Q8NDZ2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIMC1Q8NDZ2 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIMC1Q8NDZ2 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SIMC1Q8NDZ2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.1■■□□□ 1.45
SIMC1Q8NDZ2 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC24.1■■□□□ 1.45
SIMC1Q8NDZ2 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC24.09■■□□□ 1.45
SIMC1Q8NDZ2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.09■■□□□ 1.45
SIMC1Q8NDZ2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SIMC1Q8NDZ2 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.08■■□□□ 1.45
SIMC1Q8NDZ2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.08■■□□□ 1.45
SIMC1Q8NDZ2 AC021231.2-201ENST00000594613 730 ntBASIC24.08■■□□□ 1.45
SIMC1Q8NDZ2 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC24.08■■□□□ 1.45
SIMC1Q8NDZ2 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
SIMC1Q8NDZ2 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.07■■□□□ 1.44
SIMC1Q8NDZ2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SIMC1Q8NDZ2 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SIMC1Q8NDZ2 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
SIMC1Q8NDZ2 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC24.05■■□□□ 1.44
SIMC1Q8NDZ2 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
SIMC1Q8NDZ2 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms