Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATPAF2Q8N5M1 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATPAF2Q8N5M1 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.62■■□□□ 1.85
ATPAF2Q8N5M1 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
ATPAF2Q8N5M1 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
ATPAF2Q8N5M1 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.62■■□□□ 1.85
ATPAF2Q8N5M1 AL139393.2-201ENST00000608721 2025 ntBASIC26.61■■□□□ 1.85
ATPAF2Q8N5M1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
ATPAF2Q8N5M1 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
ATPAF2Q8N5M1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
ATPAF2Q8N5M1 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ATPAF2Q8N5M1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
ATPAF2Q8N5M1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
ATPAF2Q8N5M1 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.58■■□□□ 1.85
ATPAF2Q8N5M1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.58■■□□□ 1.85
ATPAF2Q8N5M1 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.57■■□□□ 1.84
ATPAF2Q8N5M1 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.57■■□□□ 1.84
ATPAF2Q8N5M1 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.57■■□□□ 1.84
ATPAF2Q8N5M1 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ATPAF2Q8N5M1 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
ATPAF2Q8N5M1 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.57■■□□□ 1.84
ATPAF2Q8N5M1 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
ATPAF2Q8N5M1 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
ATPAF2Q8N5M1 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
ATPAF2Q8N5M1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATPAF2Q8N5M1 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
ATPAF2Q8N5M1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
ATPAF2Q8N5M1 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
ATPAF2Q8N5M1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.55■■□□□ 1.84
ATPAF2Q8N5M1 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.55■■□□□ 1.84
ATPAF2Q8N5M1 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATPAF2Q8N5M1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.54■■□□□ 1.84
ATPAF2Q8N5M1 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
ATPAF2Q8N5M1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
ATPAF2Q8N5M1 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATPAF2Q8N5M1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
ATPAF2Q8N5M1 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
ATPAF2Q8N5M1 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.51■■□□□ 1.83
ATPAF2Q8N5M1 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.51■■□□□ 1.83
ATPAF2Q8N5M1 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATPAF2Q8N5M1 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
ATPAF2Q8N5M1 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.5■■□□□ 1.83
ATPAF2Q8N5M1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATPAF2Q8N5M1 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.49■■□□□ 1.83
ATPAF2Q8N5M1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.49■■□□□ 1.83
ATPAF2Q8N5M1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.48■■□□□ 1.83
ATPAF2Q8N5M1 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
ATPAF2Q8N5M1 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATPAF2Q8N5M1 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATPAF2Q8N5M1 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATPAF2Q8N5M1 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
ATPAF2Q8N5M1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
ATPAF2Q8N5M1 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATPAF2Q8N5M1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATPAF2Q8N5M1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
ATPAF2Q8N5M1 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.45■■□□□ 1.83
ATPAF2Q8N5M1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
ATPAF2Q8N5M1 AP004833.2-201ENST00000532228 1454 ntBASIC26.45■■□□□ 1.82
ATPAF2Q8N5M1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
ATPAF2Q8N5M1 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
ATPAF2Q8N5M1 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
ATPAF2Q8N5M1 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
ATPAF2Q8N5M1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
ATPAF2Q8N5M1 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
ATPAF2Q8N5M1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.41■■□□□ 1.82
ATPAF2Q8N5M1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
ATPAF2Q8N5M1 DUX4L29-201ENST00000425409 679 ntBASIC26.4■■□□□ 1.82
ATPAF2Q8N5M1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ATPAF2Q8N5M1 LINC00273-201ENST00000539813 1452 ntBASIC26.39■■□□□ 1.82
ATPAF2Q8N5M1 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.39■■□□□ 1.82
ATPAF2Q8N5M1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.39■■□□□ 1.82
ATPAF2Q8N5M1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 AC021231.2-201ENST00000594613 730 ntBASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.38■■□□□ 1.81
ATPAF2Q8N5M1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.37■■□□□ 1.81
ATPAF2Q8N5M1 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
ATPAF2Q8N5M1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.37■■□□□ 1.81
ATPAF2Q8N5M1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.37■■□□□ 1.81
ATPAF2Q8N5M1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.36■■□□□ 1.81
ATPAF2Q8N5M1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATPAF2Q8N5M1 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
ATPAF2Q8N5M1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
ATPAF2Q8N5M1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
ATPAF2Q8N5M1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATPAF2Q8N5M1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
ATPAF2Q8N5M1 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC26.34■■□□□ 1.81
ATPAF2Q8N5M1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.34■■□□□ 1.81
ATPAF2Q8N5M1 AC135983.2-203ENST00000454486 1613 ntBASIC26.34■■□□□ 1.81
ATPAF2Q8N5M1 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.33■■□□□ 1.81
ATPAF2Q8N5M1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ATPAF2Q8N5M1 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATPAF2Q8N5M1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
ATPAF2Q8N5M1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.33■■□□□ 1.81
ATPAF2Q8N5M1 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.33■■□□□ 1.81
ATPAF2Q8N5M1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.33■■□□□ 1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms