Protein–RNA interactions for Protein: Q8N1V8

LINC01561, Uncharacterized protein encoded by LINC01561, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561Q8N1V8 BX255925.1-201ENST00000566954 1854 ntBASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
LINC01561Q8N1V8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01561Q8N1V8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01561Q8N1V8 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC17.34■□□□□ 0.37
LINC01561Q8N1V8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01561Q8N1V8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
LINC01561Q8N1V8 CREM-210ENST00000374721 2020 ntTSL 5 BASIC17.33■□□□□ 0.37
LINC01561Q8N1V8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
LINC01561Q8N1V8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 AL121749.1-202ENST00000609313 2153 ntBASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
LINC01561Q8N1V8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01561Q8N1V8 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01561Q8N1V8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01561Q8N1V8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01561Q8N1V8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
LINC01561Q8N1V8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
LINC01561Q8N1V8 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC17.3■□□□□ 0.36
LINC01561Q8N1V8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01561Q8N1V8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01561Q8N1V8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
LINC01561Q8N1V8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC17.29■□□□□ 0.36
LINC01561Q8N1V8 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
LINC01561Q8N1V8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC17.28■□□□□ 0.36
LINC01561Q8N1V8 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01561Q8N1V8 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01561Q8N1V8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
LINC01561Q8N1V8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC17.27■□□□□ 0.36
LINC01561Q8N1V8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01561Q8N1V8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC17.27■□□□□ 0.36
LINC01561Q8N1V8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
LINC01561Q8N1V8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
LINC01561Q8N1V8 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
LINC01561Q8N1V8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC17.26■□□□□ 0.35
LINC01561Q8N1V8 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01561Q8N1V8 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
LINC01561Q8N1V8 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
LINC01561Q8N1V8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01561Q8N1V8 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01561Q8N1V8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
LINC01561Q8N1V8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01561Q8N1V8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC17.24■□□□□ 0.35
LINC01561Q8N1V8 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
LINC01561Q8N1V8 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.24■□□□□ 0.35
LINC01561Q8N1V8 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
LINC01561Q8N1V8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
LINC01561Q8N1V8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
LINC01561Q8N1V8 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01561Q8N1V8 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
LINC01561Q8N1V8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC17.22■□□□□ 0.35
LINC01561Q8N1V8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01561Q8N1V8 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
LINC01561Q8N1V8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01561Q8N1V8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01561Q8N1V8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
LINC01561Q8N1V8 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 AC127502.1-201ENST00000399971 1502 ntBASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 LINC01003-201ENST00000564834 1764 ntBASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
LINC01561Q8N1V8 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
LINC01561Q8N1V8 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01561Q8N1V8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
LINC01561Q8N1V8 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC17.18■□□□□ 0.34
LINC01561Q8N1V8 RARRES2P7-201ENST00000567349 469 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms