Protein–RNA interactions for Protein: Q8K353

Cystm1, Cysteine-rich and transmembrane domain-containing protein 1, mousemouse

Predictions only

Length 104 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cystm1Q8K353 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Cystm1Q8K353 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Cystm1Q8K353 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cystm1Q8K353 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cystm1Q8K353 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Cystm1Q8K353 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cystm1Q8K353 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cystm1Q8K353 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cystm1Q8K353 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Cystm1Q8K353 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Cystm1Q8K353 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Cystm1Q8K353 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Cystm1Q8K353 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cystm1Q8K353 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Cystm1Q8K353 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cystm1Q8K353 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cystm1Q8K353 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Cystm1Q8K353 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cystm1Q8K353 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cystm1Q8K353 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Cystm1Q8K353 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC14.86□□□□□ -0.03
Cystm1Q8K353 Gm16148-201ENSMUST00000119653 893 ntBASIC14.86□□□□□ -0.03
Cystm1Q8K353 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Cystm1Q8K353 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Cystm1Q8K353 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Cystm1Q8K353 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cystm1Q8K353 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cystm1Q8K353 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Cystm1Q8K353 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC14.84□□□□□ -0.03
Cystm1Q8K353 Gm6345-201ENSMUST00000180378 1691 ntBASIC14.84□□□□□ -0.03
Cystm1Q8K353 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cystm1Q8K353 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cystm1Q8K353 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cystm1Q8K353 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cystm1Q8K353 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Cystm1Q8K353 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC14.81□□□□□ -0.04
Cystm1Q8K353 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cystm1Q8K353 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cystm1Q8K353 Peli2-204ENSMUST00000226513 1320 ntBASIC14.81□□□□□ -0.04
Cystm1Q8K353 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Cystm1Q8K353 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cystm1Q8K353 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Cystm1Q8K353 Mipep-204ENSMUST00000225043 1548 ntBASIC14.81□□□□□ -0.04
Cystm1Q8K353 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.8□□□□□ -0.04
Cystm1Q8K353 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cystm1Q8K353 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cystm1Q8K353 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cystm1Q8K353 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Cystm1Q8K353 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cystm1Q8K353 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cystm1Q8K353 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cystm1Q8K353 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Cystm1Q8K353 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cystm1Q8K353 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Cystm1Q8K353 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Cystm1Q8K353 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cystm1Q8K353 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Cystm1Q8K353 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Cystm1Q8K353 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Cystm1Q8K353 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Cystm1Q8K353 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cystm1Q8K353 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Cystm1Q8K353 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cystm1Q8K353 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Cystm1Q8K353 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC14.76□□□□□ -0.05
Cystm1Q8K353 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cystm1Q8K353 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cystm1Q8K353 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Cystm1Q8K353 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Cystm1Q8K353 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cystm1Q8K353 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cystm1Q8K353 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cystm1Q8K353 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Cystm1Q8K353 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Cystm1Q8K353 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Cystm1Q8K353 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC14.73□□□□□ -0.05
Cystm1Q8K353 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC14.73□□□□□ -0.05
Cystm1Q8K353 1700069B07Rik-202ENSMUST00000191155 939 ntBASIC14.73□□□□□ -0.05
Cystm1Q8K353 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cystm1Q8K353 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cystm1Q8K353 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Cystm1Q8K353 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Cystm1Q8K353 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Cystm1Q8K353 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.72□□□□□ -0.05
Cystm1Q8K353 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cystm1Q8K353 Tdp2-203ENSMUST00000223804 1136 ntBASIC14.72□□□□□ -0.05
Cystm1Q8K353 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Cystm1Q8K353 Gm38160-201ENSMUST00000193090 2499 ntBASIC14.72□□□□□ -0.05
Cystm1Q8K353 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cystm1Q8K353 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cystm1Q8K353 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Cystm1Q8K353 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cystm1Q8K353 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Cystm1Q8K353 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cystm1Q8K353 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
Cystm1Q8K353 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.06
Cystm1Q8K353 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC14.71□□□□□ -0.06
Cystm1Q8K353 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cystm1Q8K353 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Cystm1Q8K353 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms