Protein–RNA interactions for Protein: Q8K1X4

Nckap1l, Nck-associated protein 1-like, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1lQ8K1X4 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC23.12■■□□□ 1.29
Nckap1lQ8K1X4 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Nckap1lQ8K1X4 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
Nckap1lQ8K1X4 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC23.12■■□□□ 1.29
Nckap1lQ8K1X4 AC157572.2-201ENSMUST00000226970 908 ntBASIC23.12■■□□□ 1.29
Nckap1lQ8K1X4 1810026B05Rik-202ENSMUST00000184554 782 ntTSL 3 BASIC23.11■■□□□ 1.29
Nckap1lQ8K1X4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Nckap1lQ8K1X4 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Nckap1lQ8K1X4 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Nckap1lQ8K1X4 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Nckap1lQ8K1X4 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Nckap1lQ8K1X4 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC23.09■■□□□ 1.29
Nckap1lQ8K1X4 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Nckap1lQ8K1X4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nckap1lQ8K1X4 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nckap1lQ8K1X4 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Nckap1lQ8K1X4 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Nckap1lQ8K1X4 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Nckap1lQ8K1X4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Nckap1lQ8K1X4 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
Nckap1lQ8K1X4 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nckap1lQ8K1X4 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nckap1lQ8K1X4 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nckap1lQ8K1X4 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Nckap1lQ8K1X4 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Nckap1lQ8K1X4 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Nckap1lQ8K1X4 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.02■■□□□ 1.28
Nckap1lQ8K1X4 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Nckap1lQ8K1X4 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23■■□□□ 1.27
Nckap1lQ8K1X4 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.98■■□□□ 1.27
Nckap1lQ8K1X4 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nckap1lQ8K1X4 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Nckap1lQ8K1X4 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nckap1lQ8K1X4 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nckap1lQ8K1X4 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nckap1lQ8K1X4 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nckap1lQ8K1X4 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Nckap1lQ8K1X4 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.96■■□□□ 1.27
Nckap1lQ8K1X4 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC22.96■■□□□ 1.27
Nckap1lQ8K1X4 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nckap1lQ8K1X4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC22.96■■□□□ 1.27
Nckap1lQ8K1X4 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nckap1lQ8K1X4 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Nckap1lQ8K1X4 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC22.95■■□□□ 1.26
Nckap1lQ8K1X4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Nckap1lQ8K1X4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nckap1lQ8K1X4 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Nckap1lQ8K1X4 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC22.94■■□□□ 1.26
Nckap1lQ8K1X4 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Nckap1lQ8K1X4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Nckap1lQ8K1X4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Nckap1lQ8K1X4 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC22.92■■□□□ 1.26
Nckap1lQ8K1X4 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.92■■□□□ 1.26
Nckap1lQ8K1X4 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Nckap1lQ8K1X4 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nckap1lQ8K1X4 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nckap1lQ8K1X4 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Nckap1lQ8K1X4 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC22.91■■□□□ 1.26
Nckap1lQ8K1X4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC22.9■■□□□ 1.26
Nckap1lQ8K1X4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Nckap1lQ8K1X4 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.26
Nckap1lQ8K1X4 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC22.89■■□□□ 1.25
Nckap1lQ8K1X4 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
Nckap1lQ8K1X4 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Nckap1lQ8K1X4 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Nckap1lQ8K1X4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nckap1lQ8K1X4 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
Nckap1lQ8K1X4 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Nckap1lQ8K1X4 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC22.83■■□□□ 1.25
Nckap1lQ8K1X4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nckap1lQ8K1X4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nckap1lQ8K1X4 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nckap1lQ8K1X4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.83■■□□□ 1.25
Nckap1lQ8K1X4 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.83■■□□□ 1.24
Nckap1lQ8K1X4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nckap1lQ8K1X4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Nckap1lQ8K1X4 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC22.82■■□□□ 1.24
Nckap1lQ8K1X4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Nckap1lQ8K1X4 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Nckap1lQ8K1X4 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Nckap1lQ8K1X4 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
Nckap1lQ8K1X4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nckap1lQ8K1X4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
Nckap1lQ8K1X4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Nckap1lQ8K1X4 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.79■■□□□ 1.24
Nckap1lQ8K1X4 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.79■■□□□ 1.24
Nckap1lQ8K1X4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC22.79■■□□□ 1.24
Nckap1lQ8K1X4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nckap1lQ8K1X4 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Nckap1lQ8K1X4 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC22.78■■□□□ 1.24
Nckap1lQ8K1X4 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Nckap1lQ8K1X4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Nckap1lQ8K1X4 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Nckap1lQ8K1X4 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Nckap1lQ8K1X4 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nckap1lQ8K1X4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC22.74■■□□□ 1.23
Nckap1lQ8K1X4 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.74■■□□□ 1.23
Nckap1lQ8K1X4 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Nckap1lQ8K1X4 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Nckap1lQ8K1X4 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms