Protein–RNA interactions for Protein: Q8K1A6

Cc2d1a, Coiled-coil and C2 domain-containing protein 1A, mousemouse

Predictions only

Length 943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cc2d1aQ8K1A6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cc2d1aQ8K1A6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cc2d1aQ8K1A6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Cc2d1aQ8K1A6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC31.68■■■□□ 2.66
Cc2d1aQ8K1A6 Particl-201ENSMUST00000205370 1560 ntBASIC31.68■■■□□ 2.66
Cc2d1aQ8K1A6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
Cc2d1aQ8K1A6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC31.66■■■□□ 2.66
Cc2d1aQ8K1A6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cc2d1aQ8K1A6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cc2d1aQ8K1A6 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cc2d1aQ8K1A6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC31.65■■■□□ 2.66
Cc2d1aQ8K1A6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Cc2d1aQ8K1A6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Cc2d1aQ8K1A6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cc2d1aQ8K1A6 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.64■■■□□ 2.66
Cc2d1aQ8K1A6 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Cc2d1aQ8K1A6 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Cc2d1aQ8K1A6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC31.62■■■□□ 2.65
Cc2d1aQ8K1A6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC31.62■■■□□ 2.65
Cc2d1aQ8K1A6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC31.62■■■□□ 2.65
Cc2d1aQ8K1A6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Cc2d1aQ8K1A6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC31.61■■■□□ 2.65
Cc2d1aQ8K1A6 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Cc2d1aQ8K1A6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
Cc2d1aQ8K1A6 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
Cc2d1aQ8K1A6 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Cc2d1aQ8K1A6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Cc2d1aQ8K1A6 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC31.57■■■□□ 2.65
Cc2d1aQ8K1A6 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC31.57■■■□□ 2.64
Cc2d1aQ8K1A6 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.55■■■□□ 2.64
Cc2d1aQ8K1A6 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Cc2d1aQ8K1A6 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC31.54■■■□□ 2.64
Cc2d1aQ8K1A6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Cc2d1aQ8K1A6 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Cc2d1aQ8K1A6 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Cc2d1aQ8K1A6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC31.52■■■□□ 2.64
Cc2d1aQ8K1A6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC31.51■■■□□ 2.64
Cc2d1aQ8K1A6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC31.51■■■□□ 2.64
Cc2d1aQ8K1A6 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.63
Cc2d1aQ8K1A6 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC31.51■■■□□ 2.63
Cc2d1aQ8K1A6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
Cc2d1aQ8K1A6 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC31.5■■■□□ 2.63
Cc2d1aQ8K1A6 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC31.49■■■□□ 2.63
Cc2d1aQ8K1A6 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC31.49■■■□□ 2.63
Cc2d1aQ8K1A6 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Cc2d1aQ8K1A6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Cc2d1aQ8K1A6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cc2d1aQ8K1A6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC31.47■■■□□ 2.63
Cc2d1aQ8K1A6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cc2d1aQ8K1A6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Cc2d1aQ8K1A6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC31.46■■■□□ 2.63
Cc2d1aQ8K1A6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Cc2d1aQ8K1A6 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.62
Cc2d1aQ8K1A6 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC31.44■■■□□ 2.62
Cc2d1aQ8K1A6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Cc2d1aQ8K1A6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cc2d1aQ8K1A6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
Cc2d1aQ8K1A6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cc2d1aQ8K1A6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Cc2d1aQ8K1A6 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
Cc2d1aQ8K1A6 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC31.41■■■□□ 2.62
Cc2d1aQ8K1A6 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC31.4■■■□□ 2.62
Cc2d1aQ8K1A6 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC31.4■■■□□ 2.62
Cc2d1aQ8K1A6 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.39■■■□□ 2.62
Cc2d1aQ8K1A6 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC31.39■■■□□ 2.62
Cc2d1aQ8K1A6 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC31.39■■■□□ 2.61
Cc2d1aQ8K1A6 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cc2d1aQ8K1A6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cc2d1aQ8K1A6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Cc2d1aQ8K1A6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
Cc2d1aQ8K1A6 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
Cc2d1aQ8K1A6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Cc2d1aQ8K1A6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.35■■■□□ 2.61
Cc2d1aQ8K1A6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
Cc2d1aQ8K1A6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC31.34■■■□□ 2.61
Cc2d1aQ8K1A6 Scarna2-201ENSMUST00000157560 414 ntBASIC31.34■■■□□ 2.61
Cc2d1aQ8K1A6 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.34■■■□□ 2.61
Cc2d1aQ8K1A6 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC31.33■■■□□ 2.61
Cc2d1aQ8K1A6 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
Cc2d1aQ8K1A6 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC31.33■■■□□ 2.61
Cc2d1aQ8K1A6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
Cc2d1aQ8K1A6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
Cc2d1aQ8K1A6 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cc2d1aQ8K1A6 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
Cc2d1aQ8K1A6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
Cc2d1aQ8K1A6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC31.29■■■□□ 2.6
Cc2d1aQ8K1A6 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
Cc2d1aQ8K1A6 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cc2d1aQ8K1A6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
Cc2d1aQ8K1A6 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cc2d1aQ8K1A6 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
Cc2d1aQ8K1A6 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC31.27■■■□□ 2.6
Cc2d1aQ8K1A6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cc2d1aQ8K1A6 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cc2d1aQ8K1A6 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cc2d1aQ8K1A6 Gm11687-201ENSMUST00000118911 886 ntBASIC31.27■■■□□ 2.6
Cc2d1aQ8K1A6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC31.27■■■□□ 2.6
Cc2d1aQ8K1A6 Gm9806-201ENSMUST00000051080 552 ntBASIC31.26■■■□□ 2.59
Cc2d1aQ8K1A6 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC31.25■■■□□ 2.59
Cc2d1aQ8K1A6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms