Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.11■■□□□ 1.61
COL27A1Q8IZC6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 RARRES2P2-201ENST00000394842 485 ntBASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.09■■□□□ 1.61
COL27A1Q8IZC6 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC25.08■■□□□ 1.61
COL27A1Q8IZC6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
COL27A1Q8IZC6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL27A1Q8IZC6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL27A1Q8IZC6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
COL27A1Q8IZC6 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL27A1Q8IZC6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
COL27A1Q8IZC6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.06■■□□□ 1.6
COL27A1Q8IZC6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.06■■□□□ 1.6
COL27A1Q8IZC6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
COL27A1Q8IZC6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL27A1Q8IZC6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
COL27A1Q8IZC6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.05■■□□□ 1.6
COL27A1Q8IZC6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.04■■□□□ 1.6
COL27A1Q8IZC6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
COL27A1Q8IZC6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.04■■□□□ 1.6
COL27A1Q8IZC6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
COL27A1Q8IZC6 GPX1-201ENST00000419349 1106 ntBASIC25.03■■□□□ 1.6
COL27A1Q8IZC6 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
COL27A1Q8IZC6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.03■■□□□ 1.6
COL27A1Q8IZC6 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
COL27A1Q8IZC6 ABHD17AP5-201ENST00000580133 923 ntBASIC25.02■■□□□ 1.6
COL27A1Q8IZC6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
COL27A1Q8IZC6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.02■■□□□ 1.6
COL27A1Q8IZC6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25■■□□□ 1.59
COL27A1Q8IZC6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25■■□□□ 1.59
COL27A1Q8IZC6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.99■■□□□ 1.59
COL27A1Q8IZC6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL27A1Q8IZC6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
COL27A1Q8IZC6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC24.98■■□□□ 1.59
COL27A1Q8IZC6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL27A1Q8IZC6 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL27A1Q8IZC6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC24.97■■□□□ 1.59
COL27A1Q8IZC6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC24.97■■□□□ 1.59
COL27A1Q8IZC6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
COL27A1Q8IZC6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL27A1Q8IZC6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
COL27A1Q8IZC6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL27A1Q8IZC6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL27A1Q8IZC6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.94■■□□□ 1.58
COL27A1Q8IZC6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL27A1Q8IZC6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL27A1Q8IZC6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC24.92■■□□□ 1.58
COL27A1Q8IZC6 AC135983.2-203ENST00000454486 1613 ntBASIC24.92■■□□□ 1.58
COL27A1Q8IZC6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.92■■□□□ 1.58
COL27A1Q8IZC6 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL27A1Q8IZC6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL27A1Q8IZC6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL27A1Q8IZC6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC24.9■■□□□ 1.58
COL27A1Q8IZC6 WHAMMP2-203ENST00000563942 1603 ntBASIC24.9■■□□□ 1.58
COL27A1Q8IZC6 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL27A1Q8IZC6 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
COL27A1Q8IZC6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.87■■□□□ 1.57
COL27A1Q8IZC6 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC24.86■■□□□ 1.57
COL27A1Q8IZC6 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
COL27A1Q8IZC6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
COL27A1Q8IZC6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
COL27A1Q8IZC6 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.85■■□□□ 1.57
COL27A1Q8IZC6 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC24.85■■□□□ 1.57
COL27A1Q8IZC6 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL27A1Q8IZC6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL27A1Q8IZC6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC24.84■■□□□ 1.57
COL27A1Q8IZC6 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL27A1Q8IZC6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
COL27A1Q8IZC6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
COL27A1Q8IZC6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
COL27A1Q8IZC6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
COL27A1Q8IZC6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL27A1Q8IZC6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
COL27A1Q8IZC6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.82■■□□□ 1.56
COL27A1Q8IZC6 RNF126P1-201ENST00000567452 1320 ntBASIC24.82■■□□□ 1.56
COL27A1Q8IZC6 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.81■■□□□ 1.56
COL27A1Q8IZC6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL27A1Q8IZC6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
COL27A1Q8IZC6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC24.81■■□□□ 1.56
COL27A1Q8IZC6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
COL27A1Q8IZC6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
COL27A1Q8IZC6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC24.8■■□□□ 1.56
COL27A1Q8IZC6 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL27A1Q8IZC6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.79■■□□□ 1.56
COL27A1Q8IZC6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
COL27A1Q8IZC6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
COL27A1Q8IZC6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
COL27A1Q8IZC6 AC148477.6-201ENST00000623746 465 ntBASIC24.79■■□□□ 1.56
COL27A1Q8IZC6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
COL27A1Q8IZC6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.78■■□□□ 1.56
COL27A1Q8IZC6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.78■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms