Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
TMEFF1Q8IYR6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.14■■□□□ 1.77
TMEFF1Q8IYR6 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TMEFF1Q8IYR6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TMEFF1Q8IYR6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TMEFF1Q8IYR6 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
TMEFF1Q8IYR6 GPX1-201ENST00000419349 1106 ntBASIC26.12■■□□□ 1.77
TMEFF1Q8IYR6 AL161658.1-201ENST00000623641 1967 ntBASIC26.12■■□□□ 1.77
TMEFF1Q8IYR6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.11■■□□□ 1.77
TMEFF1Q8IYR6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
TMEFF1Q8IYR6 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.1■■□□□ 1.77
TMEFF1Q8IYR6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.1■■□□□ 1.77
TMEFF1Q8IYR6 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.1■■□□□ 1.77
TMEFF1Q8IYR6 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.1■■□□□ 1.77
TMEFF1Q8IYR6 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TMEFF1Q8IYR6 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMEFF1Q8IYR6 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TMEFF1Q8IYR6 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEFF1Q8IYR6 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TMEFF1Q8IYR6 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
TMEFF1Q8IYR6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TMEFF1Q8IYR6 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
TMEFF1Q8IYR6 ABHD17AP5-201ENST00000580133 923 ntBASIC26.07■■□□□ 1.76
TMEFF1Q8IYR6 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TMEFF1Q8IYR6 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
TMEFF1Q8IYR6 LINC00273-201ENST00000539813 1452 ntBASIC26.06■■□□□ 1.76
TMEFF1Q8IYR6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC26.06■■□□□ 1.76
TMEFF1Q8IYR6 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.05■■□□□ 1.76
TMEFF1Q8IYR6 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.05■■□□□ 1.76
TMEFF1Q8IYR6 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
TMEFF1Q8IYR6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TMEFF1Q8IYR6 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TMEFF1Q8IYR6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.04■■□□□ 1.76
TMEFF1Q8IYR6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC26.04■■□□□ 1.76
TMEFF1Q8IYR6 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEFF1Q8IYR6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC26.03■■□□□ 1.76
TMEFF1Q8IYR6 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TMEFF1Q8IYR6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
TMEFF1Q8IYR6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TMEFF1Q8IYR6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
TMEFF1Q8IYR6 RNF126P1-201ENST00000567452 1320 ntBASIC26.02■■□□□ 1.76
TMEFF1Q8IYR6 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
TMEFF1Q8IYR6 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
TMEFF1Q8IYR6 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC26■■□□□ 1.75
TMEFF1Q8IYR6 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC26■■□□□ 1.75
TMEFF1Q8IYR6 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC26■■□□□ 1.75
TMEFF1Q8IYR6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26■■□□□ 1.75
TMEFF1Q8IYR6 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC26■■□□□ 1.75
TMEFF1Q8IYR6 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TMEFF1Q8IYR6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TMEFF1Q8IYR6 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
TMEFF1Q8IYR6 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
TMEFF1Q8IYR6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
TMEFF1Q8IYR6 AC010864.1-201ENST00000609407 1511 ntBASIC25.97■■□□□ 1.75
TMEFF1Q8IYR6 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC25.96■■□□□ 1.75
TMEFF1Q8IYR6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
TMEFF1Q8IYR6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC25.96■■□□□ 1.75
TMEFF1Q8IYR6 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
TMEFF1Q8IYR6 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC25.95■■□□□ 1.74
TMEFF1Q8IYR6 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TMEFF1Q8IYR6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TMEFF1Q8IYR6 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
TMEFF1Q8IYR6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TMEFF1Q8IYR6 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMEFF1Q8IYR6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC25.92■■□□□ 1.74
TMEFF1Q8IYR6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.92■■□□□ 1.74
TMEFF1Q8IYR6 AC022413.1-201ENST00000624602 984 ntBASIC25.91■■□□□ 1.74
TMEFF1Q8IYR6 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.91■■□□□ 1.74
TMEFF1Q8IYR6 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
TMEFF1Q8IYR6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.74
TMEFF1Q8IYR6 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.88■■□□□ 1.73
TMEFF1Q8IYR6 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC25.88■■□□□ 1.73
TMEFF1Q8IYR6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
TMEFF1Q8IYR6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TMEFF1Q8IYR6 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEFF1Q8IYR6 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC25.87■■□□□ 1.73
TMEFF1Q8IYR6 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEFF1Q8IYR6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TMEFF1Q8IYR6 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TMEFF1Q8IYR6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.86■■□□□ 1.73
TMEFF1Q8IYR6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TMEFF1Q8IYR6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TMEFF1Q8IYR6 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
TMEFF1Q8IYR6 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEFF1Q8IYR6 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
TMEFF1Q8IYR6 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.84■■□□□ 1.73
TMEFF1Q8IYR6 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.83■■□□□ 1.73
TMEFF1Q8IYR6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.83■■□□□ 1.73
TMEFF1Q8IYR6 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
TMEFF1Q8IYR6 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
TMEFF1Q8IYR6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
TMEFF1Q8IYR6 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC25.82■■□□□ 1.72
TMEFF1Q8IYR6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.82■■□□□ 1.72
TMEFF1Q8IYR6 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
TMEFF1Q8IYR6 NTF6A-201ENST00000591175 560 ntBASIC25.81■■□□□ 1.72
TMEFF1Q8IYR6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
TMEFF1Q8IYR6 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEFF1Q8IYR6 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEFF1Q8IYR6 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TMEFF1Q8IYR6 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms