Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC32.35■■■□□ 2.77
SMC5Q8IY18 AC127502.1-201ENST00000399971 1502 ntBASIC32.35■■■□□ 2.77
SMC5Q8IY18 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC32.34■■■□□ 2.77
SMC5Q8IY18 CHML-205ENST00000638160 705 ntTSL 3 BASIC32.34■■■□□ 2.77
SMC5Q8IY18 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC32.34■■■□□ 2.77
SMC5Q8IY18 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC32.33■■■□□ 2.77
SMC5Q8IY18 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC32.33■■■□□ 2.77
SMC5Q8IY18 AP004833.2-201ENST00000532228 1454 ntBASIC32.32■■■□□ 2.76
SMC5Q8IY18 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC32.32■■■□□ 2.76
SMC5Q8IY18 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC32.32■■■□□ 2.76
SMC5Q8IY18 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.32■■■□□ 2.76
SMC5Q8IY18 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMC5Q8IY18 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC32.31■■■□□ 2.76
SMC5Q8IY18 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMC5Q8IY18 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC32.31■■■□□ 2.76
SMC5Q8IY18 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.3■■■□□ 2.76
SMC5Q8IY18 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.3■■■□□ 2.76
SMC5Q8IY18 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC32.3■■■□□ 2.76
SMC5Q8IY18 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SMC5Q8IY18 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
SMC5Q8IY18 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC32.29■■■□□ 2.76
SMC5Q8IY18 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC32.29■■■□□ 2.76
SMC5Q8IY18 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC32.28■■■□□ 2.76
SMC5Q8IY18 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC32.28■■■□□ 2.76
SMC5Q8IY18 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
SMC5Q8IY18 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
SMC5Q8IY18 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC32.27■■■□□ 2.76
SMC5Q8IY18 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
SMC5Q8IY18 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC32.26■■■□□ 2.76
SMC5Q8IY18 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC32.26■■■□□ 2.75
SMC5Q8IY18 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC32.26■■■□□ 2.75
SMC5Q8IY18 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
SMC5Q8IY18 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC32.24■■■□□ 2.75
SMC5Q8IY18 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.24■■■□□ 2.75
SMC5Q8IY18 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC32.24■■■□□ 2.75
SMC5Q8IY18 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC32.23■■■□□ 2.75
SMC5Q8IY18 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SMC5Q8IY18 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
SMC5Q8IY18 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
SMC5Q8IY18 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC32.22■■■□□ 2.75
SMC5Q8IY18 HNRNPLP2-201ENST00000568980 1570 ntBASIC32.22■■■□□ 2.75
SMC5Q8IY18 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC32.21■■■□□ 2.75
SMC5Q8IY18 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
SMC5Q8IY18 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC32.2■■■□□ 2.74
SMC5Q8IY18 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
SMC5Q8IY18 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMC5Q8IY18 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SMC5Q8IY18 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
SMC5Q8IY18 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32.18■■■□□ 2.74
SMC5Q8IY18 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC32.18■■■□□ 2.74
SMC5Q8IY18 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC32.18■■■□□ 2.74
SMC5Q8IY18 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC32.17■■■□□ 2.74
SMC5Q8IY18 AC005559.1-201ENST00000589661 871 ntBASIC32.16■■■□□ 2.74
SMC5Q8IY18 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
SMC5Q8IY18 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
SMC5Q8IY18 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC32.13■■■□□ 2.73
SMC5Q8IY18 RPS2-209ENST00000529806 993 ntTSL 3 BASIC32.13■■■□□ 2.73
SMC5Q8IY18 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMC5Q8IY18 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC32.12■■■□□ 2.73
SMC5Q8IY18 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMC5Q8IY18 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMC5Q8IY18 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
SMC5Q8IY18 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC32.12■■■□□ 2.73
SMC5Q8IY18 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
SMC5Q8IY18 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.11■■■□□ 2.73
SMC5Q8IY18 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC32.11■■■□□ 2.73
SMC5Q8IY18 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC32.11■■■□□ 2.73
SMC5Q8IY18 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC32.1■■■□□ 2.73
SMC5Q8IY18 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SMC5Q8IY18 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.1■■■□□ 2.73
SMC5Q8IY18 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
SMC5Q8IY18 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SMC5Q8IY18 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
SMC5Q8IY18 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC32.08■■■□□ 2.73
SMC5Q8IY18 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SMC5Q8IY18 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
SMC5Q8IY18 DUX4L28-201ENST00000623687 678 ntBASIC32.08■■■□□ 2.73
SMC5Q8IY18 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC32.08■■■□□ 2.73
SMC5Q8IY18 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC32.08■■■□□ 2.73
SMC5Q8IY18 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
SMC5Q8IY18 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC32.06■■■□□ 2.72
SMC5Q8IY18 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC32.06■■■□□ 2.72
SMC5Q8IY18 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC32.06■■■□□ 2.72
SMC5Q8IY18 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.06■■■□□ 2.72
SMC5Q8IY18 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC32.05■■■□□ 2.72
SMC5Q8IY18 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
SMC5Q8IY18 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC32.05■■■□□ 2.72
SMC5Q8IY18 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC32.05■■■□□ 2.72
SMC5Q8IY18 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMC5Q8IY18 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC32.04■■■□□ 2.72
SMC5Q8IY18 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SMC5Q8IY18 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
SMC5Q8IY18 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
SMC5Q8IY18 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
SMC5Q8IY18 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
SMC5Q8IY18 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC32.01■■■□□ 2.71
SMC5Q8IY18 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
SMC5Q8IY18 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC32.01■■■□□ 2.71
SMC5Q8IY18 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
SMC5Q8IY18 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC32■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms