Protein–RNA interactions for Protein: Q8IX30

SCUBE3, Signal peptide, CUB and EGF-like domain-containing protein 3, humanhuman

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3Q8IX30 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.39■■□□□ 1.98
SCUBE3Q8IX30 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
SCUBE3Q8IX30 ABCB10P3-201ENST00000561950 2166 ntBASIC27.39■■□□□ 1.97
SCUBE3Q8IX30 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
SCUBE3Q8IX30 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC27.38■■□□□ 1.97
SCUBE3Q8IX30 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
SCUBE3Q8IX30 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCUBE3Q8IX30 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
SCUBE3Q8IX30 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
SCUBE3Q8IX30 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SCUBE3Q8IX30 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
SCUBE3Q8IX30 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC27.36■■□□□ 1.97
SCUBE3Q8IX30 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
SCUBE3Q8IX30 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SCUBE3Q8IX30 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
SCUBE3Q8IX30 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
SCUBE3Q8IX30 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.32■■□□□ 1.96
SCUBE3Q8IX30 AL139393.2-201ENST00000608721 2025 ntBASIC27.31■■□□□ 1.96
SCUBE3Q8IX30 DUX4L29-201ENST00000425409 679 ntBASIC27.31■■□□□ 1.96
SCUBE3Q8IX30 AC021231.2-201ENST00000594613 730 ntBASIC27.31■■□□□ 1.96
SCUBE3Q8IX30 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCUBE3Q8IX30 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
SCUBE3Q8IX30 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC27.3■■□□□ 1.96
SCUBE3Q8IX30 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
SCUBE3Q8IX30 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCUBE3Q8IX30 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.29■■□□□ 1.96
SCUBE3Q8IX30 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
SCUBE3Q8IX30 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
SCUBE3Q8IX30 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SCUBE3Q8IX30 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SCUBE3Q8IX30 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
SCUBE3Q8IX30 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
SCUBE3Q8IX30 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC27.27■■□□□ 1.96
SCUBE3Q8IX30 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.27■■□□□ 1.96
SCUBE3Q8IX30 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
SCUBE3Q8IX30 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.26■■□□□ 1.95
SCUBE3Q8IX30 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCUBE3Q8IX30 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
SCUBE3Q8IX30 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SCUBE3Q8IX30 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC27.25■■□□□ 1.95
SCUBE3Q8IX30 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.25■■□□□ 1.95
SCUBE3Q8IX30 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
SCUBE3Q8IX30 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.25■■□□□ 1.95
SCUBE3Q8IX30 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
SCUBE3Q8IX30 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.24■■□□□ 1.95
SCUBE3Q8IX30 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.24■■□□□ 1.95
SCUBE3Q8IX30 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
SCUBE3Q8IX30 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC27.23■■□□□ 1.95
SCUBE3Q8IX30 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCUBE3Q8IX30 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCUBE3Q8IX30 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC27.23■■□□□ 1.95
SCUBE3Q8IX30 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SCUBE3Q8IX30 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
SCUBE3Q8IX30 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC27.22■■□□□ 1.95
SCUBE3Q8IX30 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.22■■□□□ 1.95
SCUBE3Q8IX30 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.95
SCUBE3Q8IX30 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SCUBE3Q8IX30 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
SCUBE3Q8IX30 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.2■■□□□ 1.94
SCUBE3Q8IX30 MLEC-202ENST00000412616 841 ntTSL 3 BASIC27.2■■□□□ 1.94
SCUBE3Q8IX30 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC27.2■■□□□ 1.94
SCUBE3Q8IX30 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
SCUBE3Q8IX30 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.19■■□□□ 1.94
SCUBE3Q8IX30 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC27.19■■□□□ 1.94
SCUBE3Q8IX30 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
SCUBE3Q8IX30 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC27.19■■□□□ 1.94
SCUBE3Q8IX30 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCUBE3Q8IX30 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC27.18■■□□□ 1.94
SCUBE3Q8IX30 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCUBE3Q8IX30 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC27.18■■□□□ 1.94
SCUBE3Q8IX30 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
SCUBE3Q8IX30 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SCUBE3Q8IX30 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
SCUBE3Q8IX30 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC27.17■■□□□ 1.94
SCUBE3Q8IX30 LINC00273-201ENST00000539813 1452 ntBASIC27.17■■□□□ 1.94
SCUBE3Q8IX30 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SCUBE3Q8IX30 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
SCUBE3Q8IX30 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
SCUBE3Q8IX30 ABHD17AP4-201ENST00000411545 909 ntBASIC27.16■■□□□ 1.94
SCUBE3Q8IX30 CALM3-209ENST00000597743 577 ntTSL 4 BASIC27.16■■□□□ 1.94
SCUBE3Q8IX30 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCUBE3Q8IX30 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCUBE3Q8IX30 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCUBE3Q8IX30 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
SCUBE3Q8IX30 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC27.14■■□□□ 1.94
SCUBE3Q8IX30 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
SCUBE3Q8IX30 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
SCUBE3Q8IX30 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
SCUBE3Q8IX30 AC135983.2-203ENST00000454486 1613 ntBASIC27.13■■□□□ 1.93
SCUBE3Q8IX30 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.13■■□□□ 1.93
SCUBE3Q8IX30 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
SCUBE3Q8IX30 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.13■■□□□ 1.93
SCUBE3Q8IX30 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
SCUBE3Q8IX30 AP004833.2-201ENST00000532228 1454 ntBASIC27.12■■□□□ 1.93
SCUBE3Q8IX30 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
SCUBE3Q8IX30 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC27.11■■□□□ 1.93
SCUBE3Q8IX30 ZNRF2P2-203ENST00000454624 420 ntBASIC27.11■■□□□ 1.93
SCUBE3Q8IX30 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
SCUBE3Q8IX30 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.1■■□□□ 1.93
SCUBE3Q8IX30 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms