Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
RNF135Q8IUD6 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.62■■■□□ 2.01
RNF135Q8IUD6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
RNF135Q8IUD6 ST7-202ENST00000323984 2142 ntTSL 5 BASIC27.61■■■□□ 2.01
RNF135Q8IUD6 ST7-207ENST00000393449 2127 ntTSL 5 BASIC27.61■■■□□ 2.01
RNF135Q8IUD6 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
RNF135Q8IUD6 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.6■■■□□ 2.01
RNF135Q8IUD6 AC012354.3-201ENST00000623734 483 ntBASIC27.59■■■□□ 2.01
RNF135Q8IUD6 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF135Q8IUD6 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF135Q8IUD6 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
RNF135Q8IUD6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC27.58■■■□□ 2.01
RNF135Q8IUD6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
RNF135Q8IUD6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.57■■■□□ 2
RNF135Q8IUD6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.57■■■□□ 2
RNF135Q8IUD6 NTF6A-201ENST00000591175 560 ntBASIC27.56■■■□□ 2
RNF135Q8IUD6 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC27.56■■■□□ 2
RNF135Q8IUD6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.55■■■□□ 2
RNF135Q8IUD6 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.55■■■□□ 2
RNF135Q8IUD6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
RNF135Q8IUD6 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC27.54■■■□□ 2
RNF135Q8IUD6 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
RNF135Q8IUD6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.53■■■□□ 2
RNF135Q8IUD6 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RNF135Q8IUD6 GALK1-205ENST00000588479 1866 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
RNF135Q8IUD6 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC27.52■■■□□ 2
RNF135Q8IUD6 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC27.51■■□□□ 1.99
RNF135Q8IUD6 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
RNF135Q8IUD6 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
RNF135Q8IUD6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC27.49■■□□□ 1.99
RNF135Q8IUD6 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.49■■□□□ 1.99
RNF135Q8IUD6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC27.49■■□□□ 1.99
RNF135Q8IUD6 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.48■■□□□ 1.99
RNF135Q8IUD6 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC27.48■■□□□ 1.99
RNF135Q8IUD6 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
RNF135Q8IUD6 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.47■■□□□ 1.99
RNF135Q8IUD6 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.47■■□□□ 1.99
RNF135Q8IUD6 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.47■■□□□ 1.99
RNF135Q8IUD6 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.47■■□□□ 1.99
RNF135Q8IUD6 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
RNF135Q8IUD6 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.46■■□□□ 1.99
RNF135Q8IUD6 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC27.46■■□□□ 1.99
RNF135Q8IUD6 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RNF135Q8IUD6 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
RNF135Q8IUD6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
RNF135Q8IUD6 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC27.44■■□□□ 1.98
RNF135Q8IUD6 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
RNF135Q8IUD6 ABHD17A-201ENST00000250974 1630 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
RNF135Q8IUD6 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC27.43■■□□□ 1.98
RNF135Q8IUD6 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.43■■□□□ 1.98
RNF135Q8IUD6 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RNF135Q8IUD6 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC27.42■■□□□ 1.98
RNF135Q8IUD6 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RNF135Q8IUD6 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
RNF135Q8IUD6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.41■■□□□ 1.98
RNF135Q8IUD6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
RNF135Q8IUD6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
RNF135Q8IUD6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.41■■□□□ 1.98
RNF135Q8IUD6 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
RNF135Q8IUD6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
RNF135Q8IUD6 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC27.4■■□□□ 1.98
RNF135Q8IUD6 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
RNF135Q8IUD6 AC018358.1-201ENST00000631079 1402 ntBASIC27.4■■□□□ 1.98
RNF135Q8IUD6 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.39■■□□□ 1.98
RNF135Q8IUD6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.39■■□□□ 1.98
RNF135Q8IUD6 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
RNF135Q8IUD6 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
RNF135Q8IUD6 AL033527.3-201ENST00000566366 1196 ntBASIC27.37■■□□□ 1.97
RNF135Q8IUD6 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
RNF135Q8IUD6 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RNF135Q8IUD6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RNF135Q8IUD6 AC022413.1-201ENST00000624602 984 ntBASIC27.36■■□□□ 1.97
RNF135Q8IUD6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
RNF135Q8IUD6 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
RNF135Q8IUD6 AC008813.1-201ENST00000536597 885 ntBASIC27.35■■□□□ 1.97
RNF135Q8IUD6 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
RNF135Q8IUD6 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.34■■□□□ 1.97
RNF135Q8IUD6 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.33■■□□□ 1.97
RNF135Q8IUD6 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
RNF135Q8IUD6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC27.33■■□□□ 1.97
RNF135Q8IUD6 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
RNF135Q8IUD6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC27.32■■□□□ 1.96
RNF135Q8IUD6 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF135Q8IUD6 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
RNF135Q8IUD6 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF135Q8IUD6 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
RNF135Q8IUD6 HES4-202ENST00000428771 1040 ntTSL 2 BASIC27.3■■□□□ 1.96
RNF135Q8IUD6 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
RNF135Q8IUD6 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC27.29■■□□□ 1.96
RNF135Q8IUD6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RNF135Q8IUD6 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
RNF135Q8IUD6 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
RNF135Q8IUD6 AL161658.1-201ENST00000623641 1967 ntBASIC27.29■■□□□ 1.96
RNF135Q8IUD6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.29■■□□□ 1.96
RNF135Q8IUD6 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
RNF135Q8IUD6 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF135Q8IUD6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
RNF135Q8IUD6 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC27.27■■□□□ 1.96
RNF135Q8IUD6 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
RNF135Q8IUD6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms