Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC27.58■■■□□ 2.01
Depdc1aQ8CIG0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC27.58■■■□□ 2.01
Depdc1aQ8CIG0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
Depdc1aQ8CIG0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Depdc1aQ8CIG0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
Depdc1aQ8CIG0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC27.57■■■□□ 2
Depdc1aQ8CIG0 Gm6206-201ENSMUST00000133472 2199 ntBASIC27.56■■■□□ 2
Depdc1aQ8CIG0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC27.56■■■□□ 2
Depdc1aQ8CIG0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC27.56■■■□□ 2
Depdc1aQ8CIG0 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC27.55■■■□□ 2
Depdc1aQ8CIG0 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
Depdc1aQ8CIG0 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC27.54■■■□□ 2
Depdc1aQ8CIG0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.53■■■□□ 2
Depdc1aQ8CIG0 Gm7432-201ENSMUST00000210343 879 ntBASIC27.53■■■□□ 2
Depdc1aQ8CIG0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC27.52■■■□□ 2
Depdc1aQ8CIG0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Depdc1aQ8CIG0 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC27.49■■□□□ 1.99
Depdc1aQ8CIG0 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Depdc1aQ8CIG0 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Depdc1aQ8CIG0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Depdc1aQ8CIG0 Gm9905-201ENSMUST00000065740 1845 ntBASIC27.47■■□□□ 1.99
Depdc1aQ8CIG0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Depdc1aQ8CIG0 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Depdc1aQ8CIG0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Depdc1aQ8CIG0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Depdc1aQ8CIG0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC27.44■■□□□ 1.98
Depdc1aQ8CIG0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC27.44■■□□□ 1.98
Depdc1aQ8CIG0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.42■■□□□ 1.98
Depdc1aQ8CIG0 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Depdc1aQ8CIG0 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC27.42■■□□□ 1.98
Depdc1aQ8CIG0 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Depdc1aQ8CIG0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Depdc1aQ8CIG0 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Depdc1aQ8CIG0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
Depdc1aQ8CIG0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
Depdc1aQ8CIG0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
Depdc1aQ8CIG0 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC27.37■■□□□ 1.97
Depdc1aQ8CIG0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC27.37■■□□□ 1.97
Depdc1aQ8CIG0 Gm11599-201ENSMUST00000118720 878 ntBASIC27.37■■□□□ 1.97
Depdc1aQ8CIG0 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC27.37■■□□□ 1.97
Depdc1aQ8CIG0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Depdc1aQ8CIG0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Depdc1aQ8CIG0 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC27.36■■□□□ 1.97
Depdc1aQ8CIG0 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
Depdc1aQ8CIG0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
Depdc1aQ8CIG0 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC27.35■■□□□ 1.97
Depdc1aQ8CIG0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Depdc1aQ8CIG0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Depdc1aQ8CIG0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
Depdc1aQ8CIG0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC27.34■■□□□ 1.97
Depdc1aQ8CIG0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC27.33■■□□□ 1.97
Depdc1aQ8CIG0 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC27.32■■□□□ 1.96
Depdc1aQ8CIG0 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC27.3■■□□□ 1.96
Depdc1aQ8CIG0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
Depdc1aQ8CIG0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
Depdc1aQ8CIG0 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Depdc1aQ8CIG0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
Depdc1aQ8CIG0 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
Depdc1aQ8CIG0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
Depdc1aQ8CIG0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC27.27■■□□□ 1.96
Depdc1aQ8CIG0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
Depdc1aQ8CIG0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
Depdc1aQ8CIG0 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC27.26■■□□□ 1.95
Depdc1aQ8CIG0 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
Depdc1aQ8CIG0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
Depdc1aQ8CIG0 AC131739.1-201ENSMUST00000221692 1245 ntBASIC27.25■■□□□ 1.95
Depdc1aQ8CIG0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
Depdc1aQ8CIG0 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Depdc1aQ8CIG0 Particl-201ENSMUST00000205370 1560 ntBASIC27.22■■□□□ 1.95
Depdc1aQ8CIG0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC27.21■■□□□ 1.95
Depdc1aQ8CIG0 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
Depdc1aQ8CIG0 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC27.21■■□□□ 1.95
Depdc1aQ8CIG0 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
Depdc1aQ8CIG0 Amer2-203ENSMUST00000225247 2662 ntBASIC27.2■■□□□ 1.95
Depdc1aQ8CIG0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Depdc1aQ8CIG0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
Depdc1aQ8CIG0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC27.18■■□□□ 1.94
Depdc1aQ8CIG0 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
Depdc1aQ8CIG0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
Depdc1aQ8CIG0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC27.16■■□□□ 1.94
Depdc1aQ8CIG0 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC27.16■■□□□ 1.94
Depdc1aQ8CIG0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
Depdc1aQ8CIG0 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Depdc1aQ8CIG0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC27.14■■□□□ 1.94
Depdc1aQ8CIG0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC27.13■■□□□ 1.93
Depdc1aQ8CIG0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC27.12■■□□□ 1.93
Depdc1aQ8CIG0 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC27.11■■□□□ 1.93
Depdc1aQ8CIG0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Depdc1aQ8CIG0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
Depdc1aQ8CIG0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC27.11■■□□□ 1.93
Depdc1aQ8CIG0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Depdc1aQ8CIG0 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
Depdc1aQ8CIG0 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC27.1■■□□□ 1.93
Depdc1aQ8CIG0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms