Protein–RNA interactions for Protein: Q8CGW4

Sox30, Transcription factor SOX-30, mousemouse

Predictions only

Length 782 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox30Q8CGW4 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Sox30Q8CGW4 AC122428.3-201ENSMUST00000215551 2290 ntBASIC26.53■■□□□ 1.84
Sox30Q8CGW4 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Sox30Q8CGW4 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC26.51■■□□□ 1.83
Sox30Q8CGW4 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Sox30Q8CGW4 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sox30Q8CGW4 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC26.5■■□□□ 1.83
Sox30Q8CGW4 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sox30Q8CGW4 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Sox30Q8CGW4 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sox30Q8CGW4 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Sox30Q8CGW4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sox30Q8CGW4 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
Sox30Q8CGW4 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sox30Q8CGW4 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
Sox30Q8CGW4 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC26.45■■□□□ 1.83
Sox30Q8CGW4 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.83
Sox30Q8CGW4 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC26.45■■□□□ 1.82
Sox30Q8CGW4 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26.45■■□□□ 1.82
Sox30Q8CGW4 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC26.45■■□□□ 1.82
Sox30Q8CGW4 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sox30Q8CGW4 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
Sox30Q8CGW4 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sox30Q8CGW4 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sox30Q8CGW4 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sox30Q8CGW4 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
Sox30Q8CGW4 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sox30Q8CGW4 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC26.42■■□□□ 1.82
Sox30Q8CGW4 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sox30Q8CGW4 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sox30Q8CGW4 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox30Q8CGW4 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox30Q8CGW4 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox30Q8CGW4 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
Sox30Q8CGW4 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
Sox30Q8CGW4 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
Sox30Q8CGW4 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
Sox30Q8CGW4 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC26.37■■□□□ 1.81
Sox30Q8CGW4 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC26.37■■□□□ 1.81
Sox30Q8CGW4 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.37■■□□□ 1.81
Sox30Q8CGW4 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sox30Q8CGW4 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.35■■□□□ 1.81
Sox30Q8CGW4 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
Sox30Q8CGW4 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Sox30Q8CGW4 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Sox30Q8CGW4 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC26.33■■□□□ 1.81
Sox30Q8CGW4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
Sox30Q8CGW4 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sox30Q8CGW4 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC26.33■■□□□ 1.8
Sox30Q8CGW4 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC26.32■■□□□ 1.8
Sox30Q8CGW4 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sox30Q8CGW4 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sox30Q8CGW4 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
Sox30Q8CGW4 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sox30Q8CGW4 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sox30Q8CGW4 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC26.3■■□□□ 1.8
Sox30Q8CGW4 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sox30Q8CGW4 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sox30Q8CGW4 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sox30Q8CGW4 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC26.27■■□□□ 1.8
Sox30Q8CGW4 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sox30Q8CGW4 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Sox30Q8CGW4 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sox30Q8CGW4 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Sox30Q8CGW4 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sox30Q8CGW4 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox30Q8CGW4 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC26.25■■□□□ 1.79
Sox30Q8CGW4 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox30Q8CGW4 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC26.25■■□□□ 1.79
Sox30Q8CGW4 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
Sox30Q8CGW4 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC26.24■■□□□ 1.79
Sox30Q8CGW4 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sox30Q8CGW4 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sox30Q8CGW4 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sox30Q8CGW4 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sox30Q8CGW4 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sox30Q8CGW4 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sox30Q8CGW4 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Sox30Q8CGW4 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Sox30Q8CGW4 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sox30Q8CGW4 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC26.21■■□□□ 1.79
Sox30Q8CGW4 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
Sox30Q8CGW4 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC26.21■■□□□ 1.79
Sox30Q8CGW4 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sox30Q8CGW4 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sox30Q8CGW4 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC26.2■■□□□ 1.78
Sox30Q8CGW4 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Sox30Q8CGW4 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sox30Q8CGW4 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sox30Q8CGW4 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sox30Q8CGW4 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
Sox30Q8CGW4 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC26.19■■□□□ 1.78
Sox30Q8CGW4 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Sox30Q8CGW4 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms