Protein–RNA interactions for Protein: Q8CF20

1700020N01Rik, RIKEN cDNA 1700020N01, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
1700020N01RikQ8CF20 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
1700020N01RikQ8CF20 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
1700020N01RikQ8CF20 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
1700020N01RikQ8CF20 AC122428.3-201ENSMUST00000215551 2290 ntBASIC22.15■■□□□ 1.14
1700020N01RikQ8CF20 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC22.15■■□□□ 1.14
1700020N01RikQ8CF20 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.15■■□□□ 1.14
1700020N01RikQ8CF20 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
1700020N01RikQ8CF20 Gm16148-201ENSMUST00000119653 893 ntBASIC22.14■■□□□ 1.13
1700020N01RikQ8CF20 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
1700020N01RikQ8CF20 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
1700020N01RikQ8CF20 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
1700020N01RikQ8CF20 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
1700020N01RikQ8CF20 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
1700020N01RikQ8CF20 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
1700020N01RikQ8CF20 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
1700020N01RikQ8CF20 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
1700020N01RikQ8CF20 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
1700020N01RikQ8CF20 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
1700020N01RikQ8CF20 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
1700020N01RikQ8CF20 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
1700020N01RikQ8CF20 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.08■■□□□ 1.13
1700020N01RikQ8CF20 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.13
1700020N01RikQ8CF20 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
1700020N01RikQ8CF20 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
1700020N01RikQ8CF20 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
1700020N01RikQ8CF20 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
1700020N01RikQ8CF20 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
1700020N01RikQ8CF20 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
1700020N01RikQ8CF20 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
1700020N01RikQ8CF20 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
1700020N01RikQ8CF20 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
1700020N01RikQ8CF20 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
1700020N01RikQ8CF20 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
1700020N01RikQ8CF20 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
1700020N01RikQ8CF20 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
1700020N01RikQ8CF20 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
1700020N01RikQ8CF20 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
1700020N01RikQ8CF20 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
1700020N01RikQ8CF20 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
1700020N01RikQ8CF20 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22■■□□□ 1.11
1700020N01RikQ8CF20 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
1700020N01RikQ8CF20 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
1700020N01RikQ8CF20 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
1700020N01RikQ8CF20 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
1700020N01RikQ8CF20 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
1700020N01RikQ8CF20 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
1700020N01RikQ8CF20 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
1700020N01RikQ8CF20 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
1700020N01RikQ8CF20 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
1700020N01RikQ8CF20 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
1700020N01RikQ8CF20 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
1700020N01RikQ8CF20 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
1700020N01RikQ8CF20 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
1700020N01RikQ8CF20 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC21.96■■□□□ 1.11
1700020N01RikQ8CF20 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.96■■□□□ 1.11
1700020N01RikQ8CF20 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
1700020N01RikQ8CF20 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.96■■□□□ 1.11
1700020N01RikQ8CF20 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
1700020N01RikQ8CF20 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC21.95■■□□□ 1.1
1700020N01RikQ8CF20 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
1700020N01RikQ8CF20 Tmeff1-202ENSMUST00000123476 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
1700020N01RikQ8CF20 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.93■■□□□ 1.1
1700020N01RikQ8CF20 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
1700020N01RikQ8CF20 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
1700020N01RikQ8CF20 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
1700020N01RikQ8CF20 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
1700020N01RikQ8CF20 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
1700020N01RikQ8CF20 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
1700020N01RikQ8CF20 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.9■■□□□ 1.1
1700020N01RikQ8CF20 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
1700020N01RikQ8CF20 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
1700020N01RikQ8CF20 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC21.89■■□□□ 1.09
1700020N01RikQ8CF20 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
1700020N01RikQ8CF20 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 Ccdc122-202ENSMUST00000095625 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
1700020N01RikQ8CF20 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
1700020N01RikQ8CF20 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
1700020N01RikQ8CF20 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
1700020N01RikQ8CF20 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
1700020N01RikQ8CF20 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
1700020N01RikQ8CF20 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
1700020N01RikQ8CF20 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.86■■□□□ 1.09
1700020N01RikQ8CF20 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
1700020N01RikQ8CF20 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
1700020N01RikQ8CF20 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
1700020N01RikQ8CF20 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
1700020N01RikQ8CF20 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
1700020N01RikQ8CF20 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.85■■□□□ 1.09
1700020N01RikQ8CF20 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
1700020N01RikQ8CF20 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
1700020N01RikQ8CF20 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
1700020N01RikQ8CF20 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
1700020N01RikQ8CF20 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
1700020N01RikQ8CF20 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
1700020N01RikQ8CF20 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms