Protein–RNA interactions for Protein: Q8CDR2

Rsph6a, Radial spoke head protein 6 homolog A, mousemouse

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rsph6aQ8CDR2 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rsph6aQ8CDR2 Pcf11-205ENSMUST00000208255 1720 ntBASIC31.94■■■□□ 2.7
Rsph6aQ8CDR2 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
Rsph6aQ8CDR2 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rsph6aQ8CDR2 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
Rsph6aQ8CDR2 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Rsph6aQ8CDR2 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC31.91■■■□□ 2.7
Rsph6aQ8CDR2 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rsph6aQ8CDR2 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Rsph6aQ8CDR2 Gm11599-201ENSMUST00000118720 878 ntBASIC31.9■■■□□ 2.7
Rsph6aQ8CDR2 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC31.9■■■□□ 2.7
Rsph6aQ8CDR2 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC31.89■■■□□ 2.7
Rsph6aQ8CDR2 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Rsph6aQ8CDR2 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC31.88■■■□□ 2.69
Rsph6aQ8CDR2 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Rsph6aQ8CDR2 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Rsph6aQ8CDR2 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Rsph6aQ8CDR2 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC31.84■■■□□ 2.69
Rsph6aQ8CDR2 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Rsph6aQ8CDR2 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Rsph6aQ8CDR2 Gm43445-201ENSMUST00000198564 2091 ntBASIC31.83■■■□□ 2.69
Rsph6aQ8CDR2 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Rsph6aQ8CDR2 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
Rsph6aQ8CDR2 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC31.81■■■□□ 2.68
Rsph6aQ8CDR2 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC31.81■■■□□ 2.68
Rsph6aQ8CDR2 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC31.8■■■□□ 2.68
Rsph6aQ8CDR2 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC31.8■■■□□ 2.68
Rsph6aQ8CDR2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC31.79■■■□□ 2.68
Rsph6aQ8CDR2 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
Rsph6aQ8CDR2 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC31.77■■■□□ 2.68
Rsph6aQ8CDR2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Rsph6aQ8CDR2 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC31.76■■■□□ 2.67
Rsph6aQ8CDR2 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
Rsph6aQ8CDR2 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rsph6aQ8CDR2 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Rsph6aQ8CDR2 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Rsph6aQ8CDR2 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
Rsph6aQ8CDR2 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
Rsph6aQ8CDR2 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.67
Rsph6aQ8CDR2 AC131739.1-201ENSMUST00000221692 1245 ntBASIC31.68■■■□□ 2.66
Rsph6aQ8CDR2 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
Rsph6aQ8CDR2 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC31.67■■■□□ 2.66
Rsph6aQ8CDR2 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC31.65■■■□□ 2.66
Rsph6aQ8CDR2 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Rsph6aQ8CDR2 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC31.64■■■□□ 2.66
Rsph6aQ8CDR2 Gm6206-201ENSMUST00000133472 2199 ntBASIC31.63■■■□□ 2.65
Rsph6aQ8CDR2 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
Rsph6aQ8CDR2 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rsph6aQ8CDR2 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Rsph6aQ8CDR2 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC31.62■■■□□ 2.65
Rsph6aQ8CDR2 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC31.62■■■□□ 2.65
Rsph6aQ8CDR2 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC31.62■■■□□ 2.65
Rsph6aQ8CDR2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
Rsph6aQ8CDR2 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Rsph6aQ8CDR2 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rsph6aQ8CDR2 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
Rsph6aQ8CDR2 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Rsph6aQ8CDR2 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC31.59■■■□□ 2.65
Rsph6aQ8CDR2 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Rsph6aQ8CDR2 Particl-201ENSMUST00000205370 1560 ntBASIC31.59■■■□□ 2.65
Rsph6aQ8CDR2 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
Rsph6aQ8CDR2 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Rsph6aQ8CDR2 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC31.58■■■□□ 2.65
Rsph6aQ8CDR2 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Rsph6aQ8CDR2 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
Rsph6aQ8CDR2 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC31.56■■■□□ 2.64
Rsph6aQ8CDR2 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rsph6aQ8CDR2 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
Rsph6aQ8CDR2 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Rsph6aQ8CDR2 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC31.53■■■□□ 2.64
Rsph6aQ8CDR2 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Rsph6aQ8CDR2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Rsph6aQ8CDR2 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Rsph6aQ8CDR2 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC31.52■■■□□ 2.64
Rsph6aQ8CDR2 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
Rsph6aQ8CDR2 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC31.51■■■□□ 2.64
Rsph6aQ8CDR2 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.51■■■□□ 2.63
Rsph6aQ8CDR2 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC31.5■■■□□ 2.63
Rsph6aQ8CDR2 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC31.5■■■□□ 2.63
Rsph6aQ8CDR2 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC31.5■■■□□ 2.63
Rsph6aQ8CDR2 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC31.5■■■□□ 2.63
Rsph6aQ8CDR2 Gm9905-201ENSMUST00000065740 1845 ntBASIC31.49■■■□□ 2.63
Rsph6aQ8CDR2 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
Rsph6aQ8CDR2 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC31.48■■■□□ 2.63
Rsph6aQ8CDR2 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC31.48■■■□□ 2.63
Rsph6aQ8CDR2 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
Rsph6aQ8CDR2 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
Rsph6aQ8CDR2 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC31.46■■■□□ 2.63
Rsph6aQ8CDR2 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rsph6aQ8CDR2 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
Rsph6aQ8CDR2 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC31.43■■■□□ 2.62
Rsph6aQ8CDR2 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC31.43■■■□□ 2.62
Rsph6aQ8CDR2 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
Rsph6aQ8CDR2 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
Rsph6aQ8CDR2 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
Rsph6aQ8CDR2 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC31.4■■■□□ 2.62
Rsph6aQ8CDR2 Gm11175-201ENSMUST00000116172 543 ntBASIC31.39■■■□□ 2.62
Rsph6aQ8CDR2 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC31.39■■■□□ 2.61
Rsph6aQ8CDR2 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC31.38■■■□□ 2.61
Rsph6aQ8CDR2 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms