Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC30.73■■■□□ 2.51
Ccdc60Q8C4J0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC30.73■■■□□ 2.51
Ccdc60Q8C4J0 Nkain2-201ENSMUST00000092602 558 ntBASIC30.73■■■□□ 2.51
Ccdc60Q8C4J0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
Ccdc60Q8C4J0 Fezf2-202ENSMUST00000224023 1917 ntBASIC30.73■■■□□ 2.51
Ccdc60Q8C4J0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc60Q8C4J0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc60Q8C4J0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Ccdc60Q8C4J0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Ccdc60Q8C4J0 Gm30023-201ENSMUST00000197970 889 ntBASIC30.7■■■□□ 2.51
Ccdc60Q8C4J0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccdc60Q8C4J0 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC30.69■■■□□ 2.5
Ccdc60Q8C4J0 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC30.69■■■□□ 2.5
Ccdc60Q8C4J0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC30.69■■■□□ 2.5
Ccdc60Q8C4J0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC30.68■■■□□ 2.5
Ccdc60Q8C4J0 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC30.68■■■□□ 2.5
Ccdc60Q8C4J0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC30.68■■■□□ 2.5
Ccdc60Q8C4J0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC30.67■■■□□ 2.5
Ccdc60Q8C4J0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Ccdc60Q8C4J0 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc60Q8C4J0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc60Q8C4J0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
Ccdc60Q8C4J0 Gm6821-201ENSMUST00000107540 542 ntBASIC30.65■■■□□ 2.5
Ccdc60Q8C4J0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC30.65■■■□□ 2.5
Ccdc60Q8C4J0 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC30.64■■■□□ 2.5
Ccdc60Q8C4J0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc60Q8C4J0 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Ccdc60Q8C4J0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC30.62■■■□□ 2.49
Ccdc60Q8C4J0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc60Q8C4J0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc60Q8C4J0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc60Q8C4J0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Ccdc60Q8C4J0 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC30.61■■■□□ 2.49
Ccdc60Q8C4J0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
Ccdc60Q8C4J0 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Ccdc60Q8C4J0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC30.59■■■□□ 2.49
Ccdc60Q8C4J0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc60Q8C4J0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Ccdc60Q8C4J0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC30.57■■■□□ 2.48
Ccdc60Q8C4J0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC30.57■■■□□ 2.48
Ccdc60Q8C4J0 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc60Q8C4J0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc60Q8C4J0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc60Q8C4J0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
Ccdc60Q8C4J0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC30.55■■■□□ 2.48
Ccdc60Q8C4J0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
Ccdc60Q8C4J0 Gm8503-201ENSMUST00000118131 455 ntBASIC30.54■■■□□ 2.48
Ccdc60Q8C4J0 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC30.54■■■□□ 2.48
Ccdc60Q8C4J0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc60Q8C4J0 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc60Q8C4J0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC30.53■■■□□ 2.48
Ccdc60Q8C4J0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
Ccdc60Q8C4J0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc60Q8C4J0 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC30.5■■■□□ 2.47
Ccdc60Q8C4J0 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc60Q8C4J0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
Ccdc60Q8C4J0 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC30.5■■■□□ 2.47
Ccdc60Q8C4J0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc60Q8C4J0 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC30.49■■■□□ 2.47
Ccdc60Q8C4J0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc60Q8C4J0 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc60Q8C4J0 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
Ccdc60Q8C4J0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc60Q8C4J0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc60Q8C4J0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC30.48■■■□□ 2.47
Ccdc60Q8C4J0 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC30.48■■■□□ 2.47
Ccdc60Q8C4J0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
Ccdc60Q8C4J0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
Ccdc60Q8C4J0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC30.47■■■□□ 2.47
Ccdc60Q8C4J0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC30.47■■■□□ 2.47
Ccdc60Q8C4J0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc60Q8C4J0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC30.46■■■□□ 2.47
Ccdc60Q8C4J0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC30.46■■■□□ 2.47
Ccdc60Q8C4J0 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
Ccdc60Q8C4J0 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC30.45■■■□□ 2.46
Ccdc60Q8C4J0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC30.45■■■□□ 2.46
Ccdc60Q8C4J0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
Ccdc60Q8C4J0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC30.43■■■□□ 2.46
Ccdc60Q8C4J0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc60Q8C4J0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
Ccdc60Q8C4J0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC30.41■■■□□ 2.46
Ccdc60Q8C4J0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc60Q8C4J0 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
Ccdc60Q8C4J0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC30.41■■■□□ 2.46
Ccdc60Q8C4J0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC30.37■■■□□ 2.45
Ccdc60Q8C4J0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
Ccdc60Q8C4J0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc60Q8C4J0 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc60Q8C4J0 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC30.35■■■□□ 2.45
Ccdc60Q8C4J0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC30.35■■■□□ 2.45
Ccdc60Q8C4J0 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC30.35■■■□□ 2.45
Ccdc60Q8C4J0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
Ccdc60Q8C4J0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC30.33■■■□□ 2.45
Ccdc60Q8C4J0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC30.32■■■□□ 2.44
Ccdc60Q8C4J0 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC30.3■■■□□ 2.44
Ccdc60Q8C4J0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc60Q8C4J0 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Ccdc60Q8C4J0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
Ccdc60Q8C4J0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC30.28■■■□□ 2.44
Ccdc60Q8C4J0 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC30.27■■■□□ 2.44
Retrieved 100 of 76,532 protein–RNA pairs in 88.1 ms