Protein–RNA interactions for Protein: Q8BGX0

Trim23, E3 ubiquitin-protein ligase TRIM23, mousemouse

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23Q8BGX0 Gm30023-201ENSMUST00000197970 889 ntBASIC23.23■■□□□ 1.31
Trim23Q8BGX0 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Trim23Q8BGX0 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim23Q8BGX0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Trim23Q8BGX0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Trim23Q8BGX0 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Trim23Q8BGX0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trim23Q8BGX0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trim23Q8BGX0 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trim23Q8BGX0 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC23.2■■□□□ 1.3
Trim23Q8BGX0 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Trim23Q8BGX0 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim23Q8BGX0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC23.19■■□□□ 1.3
Trim23Q8BGX0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trim23Q8BGX0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.18■■□□□ 1.3
Trim23Q8BGX0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim23Q8BGX0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trim23Q8BGX0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim23Q8BGX0 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trim23Q8BGX0 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Trim23Q8BGX0 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim23Q8BGX0 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trim23Q8BGX0 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC23.15■■□□□ 1.3
Trim23Q8BGX0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim23Q8BGX0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trim23Q8BGX0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Trim23Q8BGX0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim23Q8BGX0 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Trim23Q8BGX0 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.14■■□□□ 1.29
Trim23Q8BGX0 Gm960-202ENSMUST00000177696 2262 ntAPPRIS P2 TSL 5 BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
Trim23Q8BGX0 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trim23Q8BGX0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.12■■□□□ 1.29
Trim23Q8BGX0 Amer2-203ENSMUST00000225247 2662 ntBASIC23.12■■□□□ 1.29
Trim23Q8BGX0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.11■■□□□ 1.29
Trim23Q8BGX0 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim23Q8BGX0 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim23Q8BGX0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
Trim23Q8BGX0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trim23Q8BGX0 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC23.1■■□□□ 1.29
Trim23Q8BGX0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Trim23Q8BGX0 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC23.1■■□□□ 1.29
Trim23Q8BGX0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trim23Q8BGX0 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Trim23Q8BGX0 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.09■■□□□ 1.29
Trim23Q8BGX0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Trim23Q8BGX0 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
Trim23Q8BGX0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trim23Q8BGX0 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trim23Q8BGX0 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC23.07■■□□□ 1.28
Trim23Q8BGX0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Trim23Q8BGX0 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
Trim23Q8BGX0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trim23Q8BGX0 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Trim23Q8BGX0 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Trim23Q8BGX0 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim23Q8BGX0 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim23Q8BGX0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Trim23Q8BGX0 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trim23Q8BGX0 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim23Q8BGX0 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Trim23Q8BGX0 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Trim23Q8BGX0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim23Q8BGX0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trim23Q8BGX0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
Trim23Q8BGX0 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.99■■□□□ 1.27
Trim23Q8BGX0 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim23Q8BGX0 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Trim23Q8BGX0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.98■■□□□ 1.27
Trim23Q8BGX0 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.97■■□□□ 1.27
Trim23Q8BGX0 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim23Q8BGX0 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Trim23Q8BGX0 A030003K21Rik-201ENSMUST00000222600 830 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
Trim23Q8BGX0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim23Q8BGX0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.95■■□□□ 1.26
Trim23Q8BGX0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
Trim23Q8BGX0 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim23Q8BGX0 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
Trim23Q8BGX0 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Trim23Q8BGX0 Gm7432-201ENSMUST00000210343 879 ntBASIC22.93■■□□□ 1.26
Trim23Q8BGX0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Trim23Q8BGX0 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC22.92■■□□□ 1.26
Trim23Q8BGX0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC22.92■■□□□ 1.26
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms