Protein–RNA interactions for Protein: Q8BGB5

Limd2, LIM domain-containing protein 2, mousemouse

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limd2Q8BGB5 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Limd2Q8BGB5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limd2Q8BGB5 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Limd2Q8BGB5 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limd2Q8BGB5 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Limd2Q8BGB5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Limd2Q8BGB5 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Limd2Q8BGB5 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limd2Q8BGB5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Limd2Q8BGB5 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Limd2Q8BGB5 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Limd2Q8BGB5 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Limd2Q8BGB5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC13.13□□□□□ -0.31
Limd2Q8BGB5 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Limd2Q8BGB5 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Limd2Q8BGB5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Limd2Q8BGB5 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC13.12□□□□□ -0.31
Limd2Q8BGB5 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Limd2Q8BGB5 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limd2Q8BGB5 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limd2Q8BGB5 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Limd2Q8BGB5 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Limd2Q8BGB5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Limd2Q8BGB5 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC13.1□□□□□ -0.31
Limd2Q8BGB5 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Limd2Q8BGB5 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Limd2Q8BGB5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Limd2Q8BGB5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Limd2Q8BGB5 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Limd2Q8BGB5 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Limd2Q8BGB5 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.31
Limd2Q8BGB5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Limd2Q8BGB5 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
Limd2Q8BGB5 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Limd2Q8BGB5 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Limd2Q8BGB5 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Limd2Q8BGB5 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Limd2Q8BGB5 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Limd2Q8BGB5 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Limd2Q8BGB5 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Limd2Q8BGB5 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Limd2Q8BGB5 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limd2Q8BGB5 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limd2Q8BGB5 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Limd2Q8BGB5 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limd2Q8BGB5 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC13.04□□□□□ -0.32
Limd2Q8BGB5 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Limd2Q8BGB5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limd2Q8BGB5 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limd2Q8BGB5 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Limd2Q8BGB5 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limd2Q8BGB5 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limd2Q8BGB5 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Limd2Q8BGB5 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Limd2Q8BGB5 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Limd2Q8BGB5 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limd2Q8BGB5 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Limd2Q8BGB5 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Limd2Q8BGB5 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Limd2Q8BGB5 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limd2Q8BGB5 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limd2Q8BGB5 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limd2Q8BGB5 Il17rd-202ENSMUST00000223942 2186 ntBASIC13.01□□□□□ -0.33
Limd2Q8BGB5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Limd2Q8BGB5 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC13□□□□□ -0.33
Limd2Q8BGB5 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Limd2Q8BGB5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC13□□□□□ -0.33
Limd2Q8BGB5 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Limd2Q8BGB5 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Limd2Q8BGB5 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Limd2Q8BGB5 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Limd2Q8BGB5 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Limd2Q8BGB5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Limd2Q8BGB5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limd2Q8BGB5 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Limd2Q8BGB5 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limd2Q8BGB5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limd2Q8BGB5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Limd2Q8BGB5 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limd2Q8BGB5 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limd2Q8BGB5 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limd2Q8BGB5 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC12.97□□□□□ -0.33
Limd2Q8BGB5 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Limd2Q8BGB5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC12.96□□□□□ -0.33
Limd2Q8BGB5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limd2Q8BGB5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Limd2Q8BGB5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Limd2Q8BGB5 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
Limd2Q8BGB5 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms