Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
RAB11FIP4Q86YS3 AC044849.2-201ENST00000606596 710 ntBASIC30.52■■■□□ 2.48
RAB11FIP4Q86YS3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.48
RAB11FIP4Q86YS3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.51■■■□□ 2.48
RAB11FIP4Q86YS3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.51■■■□□ 2.47
RAB11FIP4Q86YS3 AC108673.1-201ENST00000510422 1159 ntBASIC30.51■■■□□ 2.47
RAB11FIP4Q86YS3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC30.51■■■□□ 2.47
RAB11FIP4Q86YS3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC30.51■■■□□ 2.47
RAB11FIP4Q86YS3 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.49■■■□□ 2.47
RAB11FIP4Q86YS3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RAB11FIP4Q86YS3 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
RAB11FIP4Q86YS3 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
RAB11FIP4Q86YS3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
RAB11FIP4Q86YS3 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC30.47■■■□□ 2.47
RAB11FIP4Q86YS3 SHF-206ENST00000560471 2499 ntTSL 5 BASIC30.47■■■□□ 2.47
RAB11FIP4Q86YS3 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.46■■■□□ 2.47
RAB11FIP4Q86YS3 AL139393.2-201ENST00000608721 2025 ntBASIC30.46■■■□□ 2.47
RAB11FIP4Q86YS3 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.45■■■□□ 2.47
RAB11FIP4Q86YS3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC30.45■■■□□ 2.47
RAB11FIP4Q86YS3 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
RAB11FIP4Q86YS3 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
RAB11FIP4Q86YS3 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
RAB11FIP4Q86YS3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC30.42■■■□□ 2.46
RAB11FIP4Q86YS3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RAB11FIP4Q86YS3 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC30.41■■■□□ 2.46
RAB11FIP4Q86YS3 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC30.39■■■□□ 2.46
RAB11FIP4Q86YS3 BOD1-206ENST00000480951 814 ntTSL 2 BASIC30.39■■■□□ 2.46
RAB11FIP4Q86YS3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC30.39■■■□□ 2.46
RAB11FIP4Q86YS3 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
RAB11FIP4Q86YS3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
RAB11FIP4Q86YS3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC30.38■■■□□ 2.45
RAB11FIP4Q86YS3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAB11FIP4Q86YS3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAB11FIP4Q86YS3 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
RAB11FIP4Q86YS3 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC30.36■■■□□ 2.45
RAB11FIP4Q86YS3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
RAB11FIP4Q86YS3 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
RAB11FIP4Q86YS3 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.35■■■□□ 2.45
RAB11FIP4Q86YS3 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC30.35■■■□□ 2.45
RAB11FIP4Q86YS3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.34■■■□□ 2.45
RAB11FIP4Q86YS3 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC30.34■■■□□ 2.45
RAB11FIP4Q86YS3 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
RAB11FIP4Q86YS3 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAB11FIP4Q86YS3 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
RAB11FIP4Q86YS3 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RAB11FIP4Q86YS3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
RAB11FIP4Q86YS3 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC30.32■■■□□ 2.44
RAB11FIP4Q86YS3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC30.32■■■□□ 2.44
RAB11FIP4Q86YS3 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC30.31■■■□□ 2.44
RAB11FIP4Q86YS3 AC021231.2-201ENST00000594613 730 ntBASIC30.31■■■□□ 2.44
RAB11FIP4Q86YS3 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RAB11FIP4Q86YS3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
RAB11FIP4Q86YS3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.3■■■□□ 2.44
RAB11FIP4Q86YS3 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.29■■■□□ 2.44
RAB11FIP4Q86YS3 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
RAB11FIP4Q86YS3 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC30.28■■■□□ 2.44
RAB11FIP4Q86YS3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC30.28■■■□□ 2.44
RAB11FIP4Q86YS3 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC30.27■■■□□ 2.44
RAB11FIP4Q86YS3 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC30.26■■■□□ 2.44
RAB11FIP4Q86YS3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.26■■■□□ 2.43
RAB11FIP4Q86YS3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC30.26■■■□□ 2.43
RAB11FIP4Q86YS3 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC30.26■■■□□ 2.43
RAB11FIP4Q86YS3 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RAB11FIP4Q86YS3 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC30.25■■■□□ 2.43
RAB11FIP4Q86YS3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
RAB11FIP4Q86YS3 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.25■■■□□ 2.43
RAB11FIP4Q86YS3 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC30.24■■■□□ 2.43
RAB11FIP4Q86YS3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAB11FIP4Q86YS3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.24■■■□□ 2.43
RAB11FIP4Q86YS3 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC30.23■■■□□ 2.43
RAB11FIP4Q86YS3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
RAB11FIP4Q86YS3 DUX4L29-201ENST00000425409 679 ntBASIC30.23■■■□□ 2.43
RAB11FIP4Q86YS3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC30.23■■■□□ 2.43
RAB11FIP4Q86YS3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC30.23■■■□□ 2.43
RAB11FIP4Q86YS3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
RAB11FIP4Q86YS3 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.22■■■□□ 2.43
RAB11FIP4Q86YS3 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC30.22■■■□□ 2.43
RAB11FIP4Q86YS3 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
RAB11FIP4Q86YS3 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC30.22■■■□□ 2.43
RAB11FIP4Q86YS3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
RAB11FIP4Q86YS3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.21■■■□□ 2.43
RAB11FIP4Q86YS3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC30.2■■■□□ 2.43
RAB11FIP4Q86YS3 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC30.2■■■□□ 2.43
RAB11FIP4Q86YS3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
RAB11FIP4Q86YS3 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC30.2■■■□□ 2.43
RAB11FIP4Q86YS3 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC30.2■■■□□ 2.43
RAB11FIP4Q86YS3 HGH1-207ENST00000628266 258 ntTSL 5 BASIC30.2■■■□□ 2.43
RAB11FIP4Q86YS3 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
RAB11FIP4Q86YS3 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC30.19■■■□□ 2.42
RAB11FIP4Q86YS3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.18■■■□□ 2.42
RAB11FIP4Q86YS3 WHAMMP2-203ENST00000563942 1603 ntBASIC30.18■■■□□ 2.42
RAB11FIP4Q86YS3 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC30.17■■■□□ 2.42
RAB11FIP4Q86YS3 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC30.17■■■□□ 2.42
RAB11FIP4Q86YS3 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC30.16■■■□□ 2.42
RAB11FIP4Q86YS3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.16■■■□□ 2.42
RAB11FIP4Q86YS3 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
RAB11FIP4Q86YS3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
RAB11FIP4Q86YS3 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC30.15■■■□□ 2.42
RAB11FIP4Q86YS3 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
RAB11FIP4Q86YS3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC30.15■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 173 ms