Protein–RNA interactions for Protein: Q86YQ8

CPNE8, Copine-8, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE8Q86YQ8 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
CPNE8Q86YQ8 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.31■■□□□ 1.96
CPNE8Q86YQ8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 MIR762-201ENST00000390236 83 ntBASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
CPNE8Q86YQ8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.29■■□□□ 1.96
CPNE8Q86YQ8 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.28■■□□□ 1.96
CPNE8Q86YQ8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC27.28■■□□□ 1.96
CPNE8Q86YQ8 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC27.28■■□□□ 1.96
CPNE8Q86YQ8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CPNE8Q86YQ8 AC142086.6-201ENST00000621154 1765 ntBASIC27.27■■□□□ 1.96
CPNE8Q86YQ8 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
CPNE8Q86YQ8 AC127502.1-201ENST00000399971 1502 ntBASIC27.26■■□□□ 1.96
CPNE8Q86YQ8 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CPNE8Q86YQ8 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC27.26■■□□□ 1.95
CPNE8Q86YQ8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CPNE8Q86YQ8 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPNE8Q86YQ8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CPNE8Q86YQ8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.24■■□□□ 1.95
CPNE8Q86YQ8 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.24■■□□□ 1.95
CPNE8Q86YQ8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CPNE8Q86YQ8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CPNE8Q86YQ8 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CPNE8Q86YQ8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC27.22■■□□□ 1.95
CPNE8Q86YQ8 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC27.21■■□□□ 1.95
CPNE8Q86YQ8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.2■■□□□ 1.95
CPNE8Q86YQ8 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC27.2■■□□□ 1.94
CPNE8Q86YQ8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.19■■□□□ 1.94
CPNE8Q86YQ8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE8Q86YQ8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE8Q86YQ8 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
CPNE8Q86YQ8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
CPNE8Q86YQ8 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC27.17■■□□□ 1.94
CPNE8Q86YQ8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
CPNE8Q86YQ8 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.16■■□□□ 1.94
CPNE8Q86YQ8 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
CPNE8Q86YQ8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.15■■□□□ 1.94
CPNE8Q86YQ8 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CPNE8Q86YQ8 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
CPNE8Q86YQ8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.15■■□□□ 1.94
CPNE8Q86YQ8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.15■■□□□ 1.94
CPNE8Q86YQ8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CPNE8Q86YQ8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CPNE8Q86YQ8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.14■■□□□ 1.94
CPNE8Q86YQ8 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
CPNE8Q86YQ8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.14■■□□□ 1.93
CPNE8Q86YQ8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CPNE8Q86YQ8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.14■■□□□ 1.93
CPNE8Q86YQ8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
CPNE8Q86YQ8 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
CPNE8Q86YQ8 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC27.13■■□□□ 1.93
CPNE8Q86YQ8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
CPNE8Q86YQ8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
CPNE8Q86YQ8 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CPNE8Q86YQ8 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
CPNE8Q86YQ8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.1■■□□□ 1.93
CPNE8Q86YQ8 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.1■■□□□ 1.93
CPNE8Q86YQ8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPNE8Q86YQ8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.09■■□□□ 1.93
CPNE8Q86YQ8 HNRNPLP2-201ENST00000568980 1570 ntBASIC27.09■■□□□ 1.93
CPNE8Q86YQ8 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
CPNE8Q86YQ8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.08■■□□□ 1.93
CPNE8Q86YQ8 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC27.08■■□□□ 1.93
CPNE8Q86YQ8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
CPNE8Q86YQ8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
CPNE8Q86YQ8 AC005559.1-201ENST00000589661 871 ntBASIC27.07■■□□□ 1.92
CPNE8Q86YQ8 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
CPNE8Q86YQ8 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC27.06■■□□□ 1.92
CPNE8Q86YQ8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
CPNE8Q86YQ8 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
CPNE8Q86YQ8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 DUX4L28-201ENST00000623687 678 ntBASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
CPNE8Q86YQ8 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.04■■□□□ 1.92
CPNE8Q86YQ8 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.04■■□□□ 1.92
CPNE8Q86YQ8 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.04■■□□□ 1.92
CPNE8Q86YQ8 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
CPNE8Q86YQ8 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.03■■□□□ 1.92
CPNE8Q86YQ8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE8Q86YQ8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE8Q86YQ8 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE8Q86YQ8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE8Q86YQ8 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
CPNE8Q86YQ8 AP004833.2-201ENST00000532228 1454 ntBASIC27.01■■□□□ 1.91
CPNE8Q86YQ8 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC27.01■■□□□ 1.91
CPNE8Q86YQ8 AC100797.4-201ENST00000631653 1827 ntBASIC27.01■■□□□ 1.91
CPNE8Q86YQ8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
CPNE8Q86YQ8 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27■■□□□ 1.91
CPNE8Q86YQ8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CPNE8Q86YQ8 MIR6090-201ENST00000622481 60 ntBASIC26.99■■□□□ 1.91
CPNE8Q86YQ8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
CPNE8Q86YQ8 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms