Protein–RNA interactions for Protein: Q86VN1

VPS36, Vacuolar protein-sorting-associated protein 36, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36Q86VN1 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC27.79■■■□□ 2.04
VPS36Q86VN1 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.78■■■□□ 2.04
VPS36Q86VN1 CAHM-201ENST00000604200 896 ntBASIC27.78■■■□□ 2.04
VPS36Q86VN1 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS36Q86VN1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC27.77■■■□□ 2.04
VPS36Q86VN1 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
VPS36Q86VN1 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
VPS36Q86VN1 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC27.76■■■□□ 2.03
VPS36Q86VN1 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
VPS36Q86VN1 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
VPS36Q86VN1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS36Q86VN1 AP004833.2-201ENST00000532228 1454 ntBASIC27.74■■■□□ 2.03
VPS36Q86VN1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.74■■■□□ 2.03
VPS36Q86VN1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
VPS36Q86VN1 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC27.73■■■□□ 2.03
VPS36Q86VN1 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS36Q86VN1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC27.73■■■□□ 2.03
VPS36Q86VN1 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC27.72■■■□□ 2.03
VPS36Q86VN1 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC27.72■■■□□ 2.03
VPS36Q86VN1 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.72■■■□□ 2.03
VPS36Q86VN1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC27.71■■■□□ 2.03
VPS36Q86VN1 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
VPS36Q86VN1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
VPS36Q86VN1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
VPS36Q86VN1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC27.69■■■□□ 2.02
VPS36Q86VN1 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS36Q86VN1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
VPS36Q86VN1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC27.68■■■□□ 2.02
VPS36Q86VN1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
VPS36Q86VN1 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
VPS36Q86VN1 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS36Q86VN1 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
VPS36Q86VN1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC27.67■■■□□ 2.02
VPS36Q86VN1 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS36Q86VN1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS36Q86VN1 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS36Q86VN1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS36Q86VN1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.66■■■□□ 2.02
VPS36Q86VN1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC27.65■■■□□ 2.02
VPS36Q86VN1 AC127502.1-201ENST00000399971 1502 ntBASIC27.65■■■□□ 2.02
VPS36Q86VN1 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC27.65■■■□□ 2.02
VPS36Q86VN1 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC27.65■■■□□ 2.02
VPS36Q86VN1 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC27.65■■■□□ 2.02
VPS36Q86VN1 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC27.64■■■□□ 2.02
VPS36Q86VN1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
VPS36Q86VN1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
VPS36Q86VN1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.63■■■□□ 2.01
VPS36Q86VN1 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
VPS36Q86VN1 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
VPS36Q86VN1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC27.63■■■□□ 2.01
VPS36Q86VN1 SUZ12P1-203ENST00000578195 985 ntBASIC27.63■■■□□ 2.01
VPS36Q86VN1 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC27.62■■■□□ 2.01
VPS36Q86VN1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
VPS36Q86VN1 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
VPS36Q86VN1 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC27.62■■■□□ 2.01
VPS36Q86VN1 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
VPS36Q86VN1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
VPS36Q86VN1 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC27.61■■■□□ 2.01
VPS36Q86VN1 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
VPS36Q86VN1 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
VPS36Q86VN1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.6■■■□□ 2.01
VPS36Q86VN1 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC27.6■■■□□ 2.01
VPS36Q86VN1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC27.59■■■□□ 2.01
VPS36Q86VN1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
VPS36Q86VN1 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
VPS36Q86VN1 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC27.58■■■□□ 2.01
VPS36Q86VN1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
VPS36Q86VN1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
VPS36Q86VN1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
VPS36Q86VN1 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC27.58■■■□□ 2.01
VPS36Q86VN1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC27.58■■■□□ 2.01
VPS36Q86VN1 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
VPS36Q86VN1 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
VPS36Q86VN1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC27.57■■■□□ 2
VPS36Q86VN1 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
VPS36Q86VN1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC27.57■■■□□ 2
VPS36Q86VN1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.57■■■□□ 2
VPS36Q86VN1 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC27.57■■■□□ 2
VPS36Q86VN1 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC27.56■■■□□ 2
VPS36Q86VN1 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
VPS36Q86VN1 MIR762-201ENST00000390236 83 ntBASIC27.56■■■□□ 2
VPS36Q86VN1 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.56■■■□□ 2
VPS36Q86VN1 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC27.56■■■□□ 2
VPS36Q86VN1 PROC-203ENST00000409048 1586 ntTSL 5 BASIC27.56■■■□□ 2
VPS36Q86VN1 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC27.56■■■□□ 2
VPS36Q86VN1 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
VPS36Q86VN1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.55■■■□□ 2
VPS36Q86VN1 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
VPS36Q86VN1 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27.54■■■□□ 2
VPS36Q86VN1 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
VPS36Q86VN1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC27.53■■■□□ 2
VPS36Q86VN1 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
VPS36Q86VN1 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC27.53■■■□□ 2
VPS36Q86VN1 CHML-205ENST00000638160 705 ntTSL 3 BASIC27.53■■■□□ 2
VPS36Q86VN1 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC27.53■■■□□ 2
VPS36Q86VN1 RPS2-209ENST00000529806 993 ntTSL 3 BASIC27.52■■■□□ 2
VPS36Q86VN1 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC27.52■■■□□ 2
VPS36Q86VN1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.52■■■□□ 2
VPS36Q86VN1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■■□□ 2
VPS36Q86VN1 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms