Protein–RNA interactions for Protein: Q86UQ8

NFE4, Transcription factor NF-E4, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFE4Q86UQ8 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NFE4Q86UQ8 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
NFE4Q86UQ8 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
NFE4Q86UQ8 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFE4Q86UQ8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NFE4Q86UQ8 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFE4Q86UQ8 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC18.32■□□□□ 0.52
NFE4Q86UQ8 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NFE4Q86UQ8 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NFE4Q86UQ8 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NFE4Q86UQ8 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NFE4Q86UQ8 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NFE4Q86UQ8 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NFE4Q86UQ8 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NFE4Q86UQ8 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NFE4Q86UQ8 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.28■□□□□ 0.52
NFE4Q86UQ8 MIR3665-201ENST00000578708 105 ntBASIC18.28■□□□□ 0.52
NFE4Q86UQ8 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NFE4Q86UQ8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
NFE4Q86UQ8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
NFE4Q86UQ8 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
NFE4Q86UQ8 WASH5P-204ENST00000632292 975 ntBASIC18.27■□□□□ 0.52
NFE4Q86UQ8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFE4Q86UQ8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
NFE4Q86UQ8 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
NFE4Q86UQ8 DRD5P2-201ENST00000421395 2012 ntBASIC18.26■□□□□ 0.51
NFE4Q86UQ8 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
NFE4Q86UQ8 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.25■□□□□ 0.51
NFE4Q86UQ8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NFE4Q86UQ8 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.25■□□□□ 0.51
NFE4Q86UQ8 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.25■□□□□ 0.51
NFE4Q86UQ8 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NFE4Q86UQ8 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFE4Q86UQ8 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFE4Q86UQ8 RPS2P35-201ENST00000443417 897 ntBASIC18.24■□□□□ 0.51
NFE4Q86UQ8 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NFE4Q86UQ8 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NFE4Q86UQ8 AL139393.2-201ENST00000608721 2025 ntBASIC18.22■□□□□ 0.51
NFE4Q86UQ8 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFE4Q86UQ8 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFE4Q86UQ8 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NFE4Q86UQ8 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
NFE4Q86UQ8 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFE4Q86UQ8 DENR-202ENST00000455982 1052 ntTSL 5 BASIC18.21■□□□□ 0.51
NFE4Q86UQ8 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NFE4Q86UQ8 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
NFE4Q86UQ8 GNPTAB-202ENST00000392919 760 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NFE4Q86UQ8 AL162393.1-201ENST00000437852 946 ntBASIC18.2■□□□□ 0.5
NFE4Q86UQ8 INPP5A-202ENST00000368593 1432 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NFE4Q86UQ8 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NFE4Q86UQ8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.2■□□□□ 0.5
NFE4Q86UQ8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFE4Q86UQ8 MIR762-201ENST00000390236 83 ntBASIC18.19■□□□□ 0.5
NFE4Q86UQ8 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NFE4Q86UQ8 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NFE4Q86UQ8 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFE4Q86UQ8 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
NFE4Q86UQ8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 AC005559.1-201ENST00000589661 871 ntBASIC18.18■□□□□ 0.5
NFE4Q86UQ8 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NFE4Q86UQ8 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NFE4Q86UQ8 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NFE4Q86UQ8 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC18.17■□□□□ 0.5
NFE4Q86UQ8 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFE4Q86UQ8 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NFE4Q86UQ8 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC18.16■□□□□ 0.5
NFE4Q86UQ8 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC18.16■□□□□ 0.5
NFE4Q86UQ8 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NFE4Q86UQ8 CGREF1-202ENST00000312734 1610 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NFE4Q86UQ8 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.15■□□□□ 0.5
NFE4Q86UQ8 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NFE4Q86UQ8 ACTR3B-202ENST00000377776 1566 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NFE4Q86UQ8 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC18.14■□□□□ 0.49
NFE4Q86UQ8 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC18.14■□□□□ 0.49
NFE4Q86UQ8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC18.13■□□□□ 0.49
NFE4Q86UQ8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
NFE4Q86UQ8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFE4Q86UQ8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFE4Q86UQ8 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NFE4Q86UQ8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NFE4Q86UQ8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms