Protein–RNA interactions for Protein: Q86TM3

DDX53, Probable ATP-dependent RNA helicase DDX53, humanhuman

Known RBP Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX53Q86TM3 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
DDX53Q86TM3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
DDX53Q86TM3 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.94■■■□□ 2.06
DDX53Q86TM3 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC27.94■■■□□ 2.06
DDX53Q86TM3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.94■■■□□ 2.06
DDX53Q86TM3 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC27.93■■■□□ 2.06
DDX53Q86TM3 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.93■■■□□ 2.06
DDX53Q86TM3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.92■■■□□ 2.06
DDX53Q86TM3 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
DDX53Q86TM3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.92■■■□□ 2.06
DDX53Q86TM3 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
DDX53Q86TM3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.91■■■□□ 2.06
DDX53Q86TM3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
DDX53Q86TM3 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC27.89■■■□□ 2.06
DDX53Q86TM3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC27.89■■■□□ 2.06
DDX53Q86TM3 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.05
DDX53Q86TM3 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.87■■■□□ 2.05
DDX53Q86TM3 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC27.87■■■□□ 2.05
DDX53Q86TM3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.86■■■□□ 2.05
DDX53Q86TM3 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
DDX53Q86TM3 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
DDX53Q86TM3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
DDX53Q86TM3 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.83■■■□□ 2.05
DDX53Q86TM3 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
DDX53Q86TM3 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
DDX53Q86TM3 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC27.81■■■□□ 2.04
DDX53Q86TM3 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
DDX53Q86TM3 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC27.79■■■□□ 2.04
DDX53Q86TM3 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC27.79■■■□□ 2.04
DDX53Q86TM3 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.78■■■□□ 2.04
DDX53Q86TM3 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC27.77■■■□□ 2.04
DDX53Q86TM3 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.77■■■□□ 2.04
DDX53Q86TM3 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
DDX53Q86TM3 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC27.76■■■□□ 2.03
DDX53Q86TM3 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC27.76■■■□□ 2.03
DDX53Q86TM3 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC27.75■■■□□ 2.03
DDX53Q86TM3 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.75■■■□□ 2.03
DDX53Q86TM3 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
DDX53Q86TM3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
DDX53Q86TM3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC27.75■■■□□ 2.03
DDX53Q86TM3 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC27.75■■■□□ 2.03
DDX53Q86TM3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC27.75■■■□□ 2.03
DDX53Q86TM3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
DDX53Q86TM3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
DDX53Q86TM3 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC27.74■■■□□ 2.03
DDX53Q86TM3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC27.74■■■□□ 2.03
DDX53Q86TM3 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
DDX53Q86TM3 GPX1-201ENST00000419349 1106 ntBASIC27.73■■■□□ 2.03
DDX53Q86TM3 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
DDX53Q86TM3 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC27.72■■■□□ 2.03
DDX53Q86TM3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.72■■■□□ 2.03
DDX53Q86TM3 RARRES2P2-201ENST00000394842 485 ntBASIC27.72■■■□□ 2.03
DDX53Q86TM3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
DDX53Q86TM3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC27.71■■■□□ 2.03
DDX53Q86TM3 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX53Q86TM3 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.7■■■□□ 2.03
DDX53Q86TM3 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
DDX53Q86TM3 AC127502.1-201ENST00000399971 1502 ntBASIC27.7■■■□□ 2.02
DDX53Q86TM3 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.7■■■□□ 2.02
DDX53Q86TM3 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
DDX53Q86TM3 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC27.68■■■□□ 2.02
DDX53Q86TM3 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.68■■■□□ 2.02
DDX53Q86TM3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
DDX53Q86TM3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC27.67■■■□□ 2.02
DDX53Q86TM3 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
DDX53Q86TM3 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
DDX53Q86TM3 RNF126P1-201ENST00000567452 1320 ntBASIC27.66■■■□□ 2.02
DDX53Q86TM3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.65■■■□□ 2.02
DDX53Q86TM3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.65■■■□□ 2.02
DDX53Q86TM3 AC135983.2-203ENST00000454486 1613 ntBASIC27.65■■■□□ 2.02
DDX53Q86TM3 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.65■■■□□ 2.02
DDX53Q86TM3 AC008813.1-201ENST00000536597 885 ntBASIC27.64■■■□□ 2.02
DDX53Q86TM3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
DDX53Q86TM3 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
DDX53Q86TM3 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
DDX53Q86TM3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC27.62■■■□□ 2.01
DDX53Q86TM3 ABHD17AP5-201ENST00000580133 923 ntBASIC27.62■■■□□ 2.01
DDX53Q86TM3 WHAMMP2-203ENST00000563942 1603 ntBASIC27.62■■■□□ 2.01
DDX53Q86TM3 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.61■■■□□ 2.01
DDX53Q86TM3 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
DDX53Q86TM3 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
DDX53Q86TM3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC27.59■■■□□ 2.01
DDX53Q86TM3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC27.59■■■□□ 2.01
DDX53Q86TM3 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
DDX53Q86TM3 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC27.58■■■□□ 2.01
DDX53Q86TM3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC27.58■■■□□ 2.01
DDX53Q86TM3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC27.58■■■□□ 2.01
DDX53Q86TM3 AL135925.1-201ENST00000605920 1701 ntBASIC27.58■■■□□ 2.01
DDX53Q86TM3 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.57■■■□□ 2
DDX53Q86TM3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.56■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms