Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Trnp1Q80ZI1 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC28.03■■■□□ 2.08
Trnp1Q80ZI1 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC28.02■■■□□ 2.08
Trnp1Q80ZI1 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
Trnp1Q80ZI1 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trnp1Q80ZI1 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC28■■■□□ 2.07
Trnp1Q80ZI1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28■■■□□ 2.07
Trnp1Q80ZI1 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Trnp1Q80ZI1 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC28■■■□□ 2.07
Trnp1Q80ZI1 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Trnp1Q80ZI1 Gm30023-201ENSMUST00000197970 889 ntBASIC27.99■■■□□ 2.07
Trnp1Q80ZI1 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC27.97■■■□□ 2.07
Trnp1Q80ZI1 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.95■■■□□ 2.07
Trnp1Q80ZI1 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trnp1Q80ZI1 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC27.95■■■□□ 2.06
Trnp1Q80ZI1 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.95■■■□□ 2.06
Trnp1Q80ZI1 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trnp1Q80ZI1 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC27.94■■■□□ 2.06
Trnp1Q80ZI1 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC27.94■■■□□ 2.06
Trnp1Q80ZI1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Trnp1Q80ZI1 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Trnp1Q80ZI1 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Trnp1Q80ZI1 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Trnp1Q80ZI1 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.92■■■□□ 2.06
Trnp1Q80ZI1 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC27.91■■■□□ 2.06
Trnp1Q80ZI1 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC27.91■■■□□ 2.06
Trnp1Q80ZI1 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Trnp1Q80ZI1 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC27.9■■■□□ 2.06
Trnp1Q80ZI1 Scarna2-201ENSMUST00000157560 414 ntBASIC27.89■■■□□ 2.06
Trnp1Q80ZI1 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Gm12366-201ENSMUST00000121722 873 ntBASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Gm5786-201ENSMUST00000085368 882 ntBASIC27.88■■■□□ 2.05
Trnp1Q80ZI1 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.87■■■□□ 2.05
Trnp1Q80ZI1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.86■■■□□ 2.05
Trnp1Q80ZI1 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.86■■■□□ 2.05
Trnp1Q80ZI1 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC27.85■■■□□ 2.05
Trnp1Q80ZI1 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trnp1Q80ZI1 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trnp1Q80ZI1 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC27.85■■■□□ 2.05
Trnp1Q80ZI1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC27.84■■■□□ 2.05
Trnp1Q80ZI1 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
Trnp1Q80ZI1 Gm11687-201ENSMUST00000118911 886 ntBASIC27.83■■■□□ 2.05
Trnp1Q80ZI1 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.83■■■□□ 2.05
Trnp1Q80ZI1 Gm9806-201ENSMUST00000051080 552 ntBASIC27.83■■■□□ 2.05
Trnp1Q80ZI1 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC27.82■■■□□ 2.04
Trnp1Q80ZI1 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC27.82■■■□□ 2.04
Trnp1Q80ZI1 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Trnp1Q80ZI1 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
Trnp1Q80ZI1 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC27.8■■■□□ 2.04
Trnp1Q80ZI1 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC27.8■■■□□ 2.04
Trnp1Q80ZI1 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC27.79■■■□□ 2.04
Trnp1Q80ZI1 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC27.79■■■□□ 2.04
Trnp1Q80ZI1 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC27.78■■■□□ 2.04
Trnp1Q80ZI1 Pcf11-205ENSMUST00000208255 1720 ntBASIC27.78■■■□□ 2.04
Trnp1Q80ZI1 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC27.77■■■□□ 2.04
Trnp1Q80ZI1 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trnp1Q80ZI1 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC27.76■■■□□ 2.03
Trnp1Q80ZI1 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC27.76■■■□□ 2.03
Trnp1Q80ZI1 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.76■■■□□ 2.03
Trnp1Q80ZI1 Gm4799-201ENSMUST00000095396 657 ntBASIC27.76■■■□□ 2.03
Trnp1Q80ZI1 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC27.75■■■□□ 2.03
Trnp1Q80ZI1 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.75■■■□□ 2.03
Trnp1Q80ZI1 Gm16437-201ENSMUST00000025669 507 ntBASIC27.73■■■□□ 2.03
Trnp1Q80ZI1 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trnp1Q80ZI1 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Trnp1Q80ZI1 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC27.72■■■□□ 2.03
Trnp1Q80ZI1 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.72■■■□□ 2.03
Trnp1Q80ZI1 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
Trnp1Q80ZI1 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.71■■■□□ 2.03
Trnp1Q80ZI1 Pkd1-207ENSMUST00000228550 1050 ntBASIC27.71■■■□□ 2.03
Trnp1Q80ZI1 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
Trnp1Q80ZI1 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trnp1Q80ZI1 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
Trnp1Q80ZI1 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.69■■■□□ 2.02
Trnp1Q80ZI1 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
Trnp1Q80ZI1 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC27.68■■■□□ 2.02
Trnp1Q80ZI1 AC154454.1-201ENSMUST00000225253 216 ntBASIC27.68■■■□□ 2.02
Trnp1Q80ZI1 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.67■■■□□ 2.02
Trnp1Q80ZI1 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Trnp1Q80ZI1 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Trnp1Q80ZI1 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
Trnp1Q80ZI1 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.65■■■□□ 2.02
Trnp1Q80ZI1 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
Trnp1Q80ZI1 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC27.64■■■□□ 2.02
Trnp1Q80ZI1 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trnp1Q80ZI1 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
Trnp1Q80ZI1 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.01
Trnp1Q80ZI1 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC27.63■■■□□ 2.01
Trnp1Q80ZI1 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Trnp1Q80ZI1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC27.62■■■□□ 2.01
Trnp1Q80ZI1 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
Trnp1Q80ZI1 Mir3960-201ENSMUST00000198213 73 ntBASIC27.61■■■□□ 2.01
Trnp1Q80ZI1 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
Trnp1Q80ZI1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Trnp1Q80ZI1 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC27.6■■■□□ 2.01
Trnp1Q80ZI1 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC27.6■■■□□ 2.01
Retrieved 100 of 76,532 protein–RNA pairs in 178.3 ms