Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Pcdh19Q80TF3 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC23.62■■□□□ 1.37
Pcdh19Q80TF3 Snrpe-202ENSMUST00000164574 597 ntTSL 3 BASIC23.62■■□□□ 1.37
Pcdh19Q80TF3 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh19Q80TF3 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Pcdh19Q80TF3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Pcdh19Q80TF3 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh19Q80TF3 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh19Q80TF3 Clk2-201ENSMUST00000090927 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Pcdh19Q80TF3 Dtnb-211ENSMUST00000173240 2218 ntTSL 5 BASIC23.6■■□□□ 1.37
Pcdh19Q80TF3 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.59■■□□□ 1.37
Pcdh19Q80TF3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC23.59■■□□□ 1.37
Pcdh19Q80TF3 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Pcdh19Q80TF3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC23.58■■□□□ 1.37
Pcdh19Q80TF3 Gm11599-201ENSMUST00000118720 878 ntBASIC23.58■■□□□ 1.37
Pcdh19Q80TF3 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC23.58■■□□□ 1.37
Pcdh19Q80TF3 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh19Q80TF3 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Pcdh19Q80TF3 Gm30023-201ENSMUST00000197970 889 ntBASIC23.56■■□□□ 1.36
Pcdh19Q80TF3 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh19Q80TF3 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Pcdh19Q80TF3 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC23.54■■□□□ 1.36
Pcdh19Q80TF3 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh19Q80TF3 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh19Q80TF3 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC23.53■■□□□ 1.36
Pcdh19Q80TF3 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
Pcdh19Q80TF3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh19Q80TF3 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh19Q80TF3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Pcdh19Q80TF3 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Pcdh19Q80TF3 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdh19Q80TF3 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Pcdh19Q80TF3 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC23.5■■□□□ 1.35
Pcdh19Q80TF3 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh19Q80TF3 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
Pcdh19Q80TF3 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh19Q80TF3 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh19Q80TF3 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Pcdh19Q80TF3 Gm43445-201ENSMUST00000198564 2091 ntBASIC23.48■■□□□ 1.35
Pcdh19Q80TF3 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh19Q80TF3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Pcdh19Q80TF3 C130046K22Rik-201ENSMUST00000129780 727 ntTSL 5 BASIC23.48■■□□□ 1.35
Pcdh19Q80TF3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh19Q80TF3 AC131739.1-201ENSMUST00000221692 1245 ntBASIC23.47■■□□□ 1.35
Pcdh19Q80TF3 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh19Q80TF3 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Pcdh19Q80TF3 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC23.46■■□□□ 1.35
Pcdh19Q80TF3 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Pcdh19Q80TF3 E030037K01Rik-201ENSMUST00000180928 1756 ntBASIC23.45■■□□□ 1.34
Pcdh19Q80TF3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdh19Q80TF3 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdh19Q80TF3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Pcdh19Q80TF3 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdh19Q80TF3 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Pcdh19Q80TF3 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC23.44■■□□□ 1.34
Pcdh19Q80TF3 Particl-201ENSMUST00000205370 1560 ntBASIC23.43■■□□□ 1.34
Pcdh19Q80TF3 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Pcdh19Q80TF3 Gm6206-201ENSMUST00000133472 2199 ntBASIC23.42■■□□□ 1.34
Pcdh19Q80TF3 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.42■■□□□ 1.34
Pcdh19Q80TF3 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC23.41■■□□□ 1.34
Pcdh19Q80TF3 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh19Q80TF3 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh19Q80TF3 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Pcdh19Q80TF3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Pcdh19Q80TF3 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.39■■□□□ 1.33
Pcdh19Q80TF3 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh19Q80TF3 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Pcdh19Q80TF3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Pcdh19Q80TF3 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.36■■□□□ 1.33
Pcdh19Q80TF3 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Pcdh19Q80TF3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh19Q80TF3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Pcdh19Q80TF3 Ildr2-205ENSMUST00000193860 2320 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh19Q80TF3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh19Q80TF3 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Pcdh19Q80TF3 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh19Q80TF3 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh19Q80TF3 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pcdh19Q80TF3 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Pcdh19Q80TF3 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh19Q80TF3 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh19Q80TF3 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pcdh19Q80TF3 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
Pcdh19Q80TF3 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh19Q80TF3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pcdh19Q80TF3 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC23.29■■□□□ 1.32
Pcdh19Q80TF3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
Pcdh19Q80TF3 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.28■■□□□ 1.32
Pcdh19Q80TF3 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC23.27■■□□□ 1.32
Pcdh19Q80TF3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pcdh19Q80TF3 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pcdh19Q80TF3 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC23.26■■□□□ 1.31
Pcdh19Q80TF3 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC23.26■■□□□ 1.31
Pcdh19Q80TF3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Pcdh19Q80TF3 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.24■■□□□ 1.31
Pcdh19Q80TF3 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
Pcdh19Q80TF3 Mpp6-203ENSMUST00000166318 2222 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh19Q80TF3 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
Pcdh19Q80TF3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
Pcdh19Q80TF3 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Retrieved 100 of 76,532 protein–RNA pairs in 104.6 ms