Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
HIST3H2AQ7L7L0 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.45■■□□□ 1.34
HIST3H2AQ7L7L0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC23.45■■□□□ 1.34
HIST3H2AQ7L7L0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC23.45■■□□□ 1.34
HIST3H2AQ7L7L0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
HIST3H2AQ7L7L0 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
HIST3H2AQ7L7L0 SUZ12P1-203ENST00000578195 985 ntBASIC23.44■■□□□ 1.34
HIST3H2AQ7L7L0 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.44■■□□□ 1.34
HIST3H2AQ7L7L0 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC23.44■■□□□ 1.34
HIST3H2AQ7L7L0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
HIST3H2AQ7L7L0 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
HIST3H2AQ7L7L0 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
HIST3H2AQ7L7L0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
HIST3H2AQ7L7L0 AC005559.1-201ENST00000589661 871 ntBASIC23.42■■□□□ 1.34
HIST3H2AQ7L7L0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
HIST3H2AQ7L7L0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HIST3H2AQ7L7L0 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
HIST3H2AQ7L7L0 HNRNPLP2-201ENST00000568980 1570 ntBASIC23.41■■□□□ 1.34
HIST3H2AQ7L7L0 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
HIST3H2AQ7L7L0 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.4■■□□□ 1.34
HIST3H2AQ7L7L0 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
HIST3H2AQ7L7L0 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.39■■□□□ 1.34
HIST3H2AQ7L7L0 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
HIST3H2AQ7L7L0 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC23.39■■□□□ 1.34
HIST3H2AQ7L7L0 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
HIST3H2AQ7L7L0 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HIST3H2AQ7L7L0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
HIST3H2AQ7L7L0 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
HIST3H2AQ7L7L0 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
HIST3H2AQ7L7L0 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC23.36■■□□□ 1.33
HIST3H2AQ7L7L0 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
HIST3H2AQ7L7L0 AC127502.1-201ENST00000399971 1502 ntBASIC23.35■■□□□ 1.33
HIST3H2AQ7L7L0 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
HIST3H2AQ7L7L0 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
HIST3H2AQ7L7L0 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC23.34■■□□□ 1.33
HIST3H2AQ7L7L0 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HIST3H2AQ7L7L0 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
HIST3H2AQ7L7L0 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
HIST3H2AQ7L7L0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
HIST3H2AQ7L7L0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
HIST3H2AQ7L7L0 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.32■■□□□ 1.32
HIST3H2AQ7L7L0 AP004833.2-201ENST00000532228 1454 ntBASIC23.32■■□□□ 1.32
HIST3H2AQ7L7L0 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC23.32■■□□□ 1.32
HIST3H2AQ7L7L0 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
HIST3H2AQ7L7L0 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
HIST3H2AQ7L7L0 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC23.31■■□□□ 1.32
HIST3H2AQ7L7L0 AC142086.6-201ENST00000621154 1765 ntBASIC23.3■■□□□ 1.32
HIST3H2AQ7L7L0 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
HIST3H2AQ7L7L0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC23.3■■□□□ 1.32
HIST3H2AQ7L7L0 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC23.3■■□□□ 1.32
HIST3H2AQ7L7L0 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC23.3■■□□□ 1.32
HIST3H2AQ7L7L0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
HIST3H2AQ7L7L0 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
HIST3H2AQ7L7L0 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
HIST3H2AQ7L7L0 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 AC108673.1-201ENST00000510422 1159 ntBASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 MIR3665-201ENST00000578708 105 ntBASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC23.27■■□□□ 1.32
HIST3H2AQ7L7L0 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
HIST3H2AQ7L7L0 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC23.26■■□□□ 1.31
HIST3H2AQ7L7L0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
HIST3H2AQ7L7L0 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC23.26■■□□□ 1.31
HIST3H2AQ7L7L0 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC23.25■■□□□ 1.31
HIST3H2AQ7L7L0 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC23.24■■□□□ 1.31
HIST3H2AQ7L7L0 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.24■■□□□ 1.31
HIST3H2AQ7L7L0 DRD5P2-201ENST00000421395 2012 ntBASIC23.24■■□□□ 1.31
HIST3H2AQ7L7L0 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
HIST3H2AQ7L7L0 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.23■■□□□ 1.31
HIST3H2AQ7L7L0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.23■■□□□ 1.31
HIST3H2AQ7L7L0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
HIST3H2AQ7L7L0 AP006261.1-201ENST00000584783 668 ntBASIC23.22■■□□□ 1.31
HIST3H2AQ7L7L0 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 DUX4L28-201ENST00000623687 678 ntBASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC23.21■■□□□ 1.31
HIST3H2AQ7L7L0 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HIST3H2AQ7L7L0 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
HIST3H2AQ7L7L0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
HIST3H2AQ7L7L0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC23.2■■□□□ 1.3
HIST3H2AQ7L7L0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.3
HIST3H2AQ7L7L0 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
HIST3H2AQ7L7L0 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms