Protein–RNA interactions for Protein: Q70CQ4

USP31, Ubiquitin carboxyl-terminal hydrolase 31, humanhuman

Predictions only

Length 1,352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP31Q70CQ4 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC35.55■■■■□ 3.28
USP31Q70CQ4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC35.55■■■■□ 3.28
USP31Q70CQ4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC35.55■■■■□ 3.28
USP31Q70CQ4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC35.55■■■■□ 3.28
USP31Q70CQ4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC35.54■■■■□ 3.28
USP31Q70CQ4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC35.53■■■■□ 3.28
USP31Q70CQ4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC35.53■■■■□ 3.28
USP31Q70CQ4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC35.52■■■■□ 3.28
USP31Q70CQ4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC35.52■■■■□ 3.28
USP31Q70CQ4 SRP68-213ENST00000629930 165 ntTSL 5 BASIC35.52■■■■□ 3.28
USP31Q70CQ4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
USP31Q70CQ4 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC35.5■■■■□ 3.27
USP31Q70CQ4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
USP31Q70CQ4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
USP31Q70CQ4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC35.49■■■■□ 3.27
USP31Q70CQ4 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
USP31Q70CQ4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC35.48■■■■□ 3.27
USP31Q70CQ4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC35.48■■■■□ 3.27
USP31Q70CQ4 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
USP31Q70CQ4 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC35.47■■■■□ 3.27
USP31Q70CQ4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC35.47■■■■□ 3.27
USP31Q70CQ4 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC35.47■■■■□ 3.27
USP31Q70CQ4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC35.46■■■■□ 3.27
USP31Q70CQ4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC35.46■■■■□ 3.27
USP31Q70CQ4 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC35.46■■■■□ 3.27
USP31Q70CQ4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC35.46■■■■□ 3.27
USP31Q70CQ4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC35.45■■■■□ 3.27
USP31Q70CQ4 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC35.43■■■■□ 3.26
USP31Q70CQ4 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC35.43■■■■□ 3.26
USP31Q70CQ4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC35.42■■■■□ 3.26
USP31Q70CQ4 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC35.42■■■■□ 3.26
USP31Q70CQ4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC35.42■■■■□ 3.26
USP31Q70CQ4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC35.4■■■■□ 3.26
USP31Q70CQ4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC35.39■■■■□ 3.26
USP31Q70CQ4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC35.38■■■■□ 3.25
USP31Q70CQ4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
USP31Q70CQ4 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC35.37■■■■□ 3.25
USP31Q70CQ4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC35.37■■■■□ 3.25
USP31Q70CQ4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC35.37■■■■□ 3.25
USP31Q70CQ4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
USP31Q70CQ4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
USP31Q70CQ4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC35.35■■■■□ 3.25
USP31Q70CQ4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
USP31Q70CQ4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC35.34■■■■□ 3.25
USP31Q70CQ4 AC127502.1-201ENST00000399971 1502 ntBASIC35.33■■■■□ 3.25
USP31Q70CQ4 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC35.32■■■■□ 3.24
USP31Q70CQ4 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC35.31■■■■□ 3.24
USP31Q70CQ4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC35.31■■■■□ 3.24
USP31Q70CQ4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
USP31Q70CQ4 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC35.3■■■■□ 3.24
USP31Q70CQ4 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC35.3■■■■□ 3.24
USP31Q70CQ4 AC135983.2-203ENST00000454486 1613 ntBASIC35.29■■■■□ 3.24
USP31Q70CQ4 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC35.28■■■■□ 3.24
USP31Q70CQ4 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC35.28■■■■□ 3.24
USP31Q70CQ4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC35.26■■■■□ 3.24
USP31Q70CQ4 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC35.26■■■■□ 3.24
USP31Q70CQ4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC35.26■■■■□ 3.23
USP31Q70CQ4 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC35.25■■■■□ 3.23
USP31Q70CQ4 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC35.25■■■■□ 3.23
USP31Q70CQ4 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC35.24■■■■□ 3.23
USP31Q70CQ4 WHAMMP2-203ENST00000563942 1603 ntBASIC35.24■■■■□ 3.23
USP31Q70CQ4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC35.24■■■■□ 3.23
USP31Q70CQ4 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC35.23■■■■□ 3.23
USP31Q70CQ4 AL135925.1-201ENST00000605920 1701 ntBASIC35.23■■■■□ 3.23
USP31Q70CQ4 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC35.23■■■■□ 3.23
USP31Q70CQ4 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC35.23■■■■□ 3.23
USP31Q70CQ4 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
USP31Q70CQ4 RARRES2P2-201ENST00000394842 485 ntBASIC35.22■■■■□ 3.23
USP31Q70CQ4 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC35.22■■■■□ 3.23
USP31Q70CQ4 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC35.22■■■■□ 3.23
USP31Q70CQ4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC35.22■■■■□ 3.23
USP31Q70CQ4 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC35.21■■■■□ 3.23
USP31Q70CQ4 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC35.2■■■■□ 3.23
USP31Q70CQ4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC35.2■■■■□ 3.23
USP31Q70CQ4 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC35.19■■■■□ 3.22
USP31Q70CQ4 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC35.19■■■■□ 3.22
USP31Q70CQ4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC35.18■■■■□ 3.22
USP31Q70CQ4 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC35.18■■■■□ 3.22
USP31Q70CQ4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC35.18■■■■□ 3.22
USP31Q70CQ4 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC35.18■■■■□ 3.22
USP31Q70CQ4 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC35.17■■■■□ 3.22
USP31Q70CQ4 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
USP31Q70CQ4 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC35.17■■■■□ 3.22
USP31Q70CQ4 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
USP31Q70CQ4 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC35.16■■■■□ 3.22
USP31Q70CQ4 GPX1-201ENST00000419349 1106 ntBASIC35.16■■■■□ 3.22
USP31Q70CQ4 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC35.16■■■■□ 3.22
USP31Q70CQ4 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC35.15■■■■□ 3.22
USP31Q70CQ4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
USP31Q70CQ4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC35.13■■■■□ 3.21
USP31Q70CQ4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC35.13■■■■□ 3.21
USP31Q70CQ4 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC35.13■■■■□ 3.21
USP31Q70CQ4 TPT1-202ENST00000379055 948 ntTSL 2 BASIC35.13■■■■□ 3.21
Retrieved 100 of 98,524 protein–RNA pairs in 104.3 ms