Protein–RNA interactions for Protein: Q6ZRS4

CCDC129, Coiled-coil domain-containing protein 129, humanhuman

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC129Q6ZRS4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
CCDC129Q6ZRS4 ABCB10P3-201ENST00000561950 2166 ntBASIC31.3■■■□□ 2.6
CCDC129Q6ZRS4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC31.29■■■□□ 2.6
CCDC129Q6ZRS4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.29■■■□□ 2.6
CCDC129Q6ZRS4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC129Q6ZRS4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC129Q6ZRS4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.28■■■□□ 2.6
CCDC129Q6ZRS4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.27■■■□□ 2.6
CCDC129Q6ZRS4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.26■■■□□ 2.6
CCDC129Q6ZRS4 AC021231.2-201ENST00000594613 730 ntBASIC31.26■■■□□ 2.59
CCDC129Q6ZRS4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.26■■■□□ 2.59
CCDC129Q6ZRS4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.26■■■□□ 2.59
CCDC129Q6ZRS4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC129Q6ZRS4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC129Q6ZRS4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.59
CCDC129Q6ZRS4 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC31.25■■■□□ 2.59
CCDC129Q6ZRS4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC129Q6ZRS4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.24■■■□□ 2.59
CCDC129Q6ZRS4 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC31.23■■■□□ 2.59
CCDC129Q6ZRS4 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC31.23■■■□□ 2.59
CCDC129Q6ZRS4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.23■■■□□ 2.59
CCDC129Q6ZRS4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CCDC129Q6ZRS4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CCDC129Q6ZRS4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC31.21■■■□□ 2.59
CCDC129Q6ZRS4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC31.21■■■□□ 2.59
CCDC129Q6ZRS4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC31.2■■■□□ 2.59
CCDC129Q6ZRS4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.2■■■□□ 2.58
CCDC129Q6ZRS4 AL139393.2-201ENST00000608721 2025 ntBASIC31.2■■■□□ 2.58
CCDC129Q6ZRS4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC31.19■■■□□ 2.58
CCDC129Q6ZRS4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.19■■■□□ 2.58
CCDC129Q6ZRS4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.19■■■□□ 2.58
CCDC129Q6ZRS4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.18■■■□□ 2.58
CCDC129Q6ZRS4 DUX4L29-201ENST00000425409 679 ntBASIC31.18■■■□□ 2.58
CCDC129Q6ZRS4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC31.18■■■□□ 2.58
CCDC129Q6ZRS4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CCDC129Q6ZRS4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC129Q6ZRS4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC31.17■■■□□ 2.58
CCDC129Q6ZRS4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.17■■■□□ 2.58
CCDC129Q6ZRS4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.16■■■□□ 2.58
CCDC129Q6ZRS4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CCDC129Q6ZRS4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC129Q6ZRS4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC31.15■■■□□ 2.58
CCDC129Q6ZRS4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC31.14■■■□□ 2.58
CCDC129Q6ZRS4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC31.14■■■□□ 2.58
CCDC129Q6ZRS4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC31.14■■■□□ 2.58
CCDC129Q6ZRS4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC129Q6ZRS4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CCDC129Q6ZRS4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.13■■■□□ 2.57
CCDC129Q6ZRS4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC129Q6ZRS4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.13■■■□□ 2.57
CCDC129Q6ZRS4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC31.12■■■□□ 2.57
CCDC129Q6ZRS4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CCDC129Q6ZRS4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC31.12■■■□□ 2.57
CCDC129Q6ZRS4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC31.12■■■□□ 2.57
CCDC129Q6ZRS4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.12■■■□□ 2.57
CCDC129Q6ZRS4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC129Q6ZRS4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC129Q6ZRS4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.11■■■□□ 2.57
CCDC129Q6ZRS4 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
CCDC129Q6ZRS4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC129Q6ZRS4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC129Q6ZRS4 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC31.09■■■□□ 2.57
CCDC129Q6ZRS4 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
CCDC129Q6ZRS4 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC129Q6ZRS4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.08■■■□□ 2.57
CCDC129Q6ZRS4 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
CCDC129Q6ZRS4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC129Q6ZRS4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
CCDC129Q6ZRS4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC31.07■■■□□ 2.56
CCDC129Q6ZRS4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.06■■■□□ 2.56
CCDC129Q6ZRS4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC31.06■■■□□ 2.56
CCDC129Q6ZRS4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CCDC129Q6ZRS4 ABHD17AP4-201ENST00000411545 909 ntBASIC31.05■■■□□ 2.56
CCDC129Q6ZRS4 MIR7108-201ENST00000614319 87 ntBASIC31.05■■■□□ 2.56
CCDC129Q6ZRS4 LINC00273-201ENST00000539813 1452 ntBASIC31.05■■■□□ 2.56
CCDC129Q6ZRS4 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC129Q6ZRS4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC129Q6ZRS4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC31.04■■■□□ 2.56
CCDC129Q6ZRS4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CCDC129Q6ZRS4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.03■■■□□ 2.56
CCDC129Q6ZRS4 WHAMMP2-203ENST00000563942 1603 ntBASIC31.02■■■□□ 2.56
CCDC129Q6ZRS4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC31.02■■■□□ 2.56
CCDC129Q6ZRS4 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC129Q6ZRS4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
CCDC129Q6ZRS4 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
CCDC129Q6ZRS4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CCDC129Q6ZRS4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.01■■■□□ 2.56
CCDC129Q6ZRS4 AC135983.2-203ENST00000454486 1613 ntBASIC31.01■■■□□ 2.55
CCDC129Q6ZRS4 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
CCDC129Q6ZRS4 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 ZNRF2P2-203ENST00000454624 420 ntBASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.99■■■□□ 2.55
CCDC129Q6ZRS4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CCDC129Q6ZRS4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms