Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Snrnp40Q6PE01 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Snrnp40Q6PE01 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
Snrnp40Q6PE01 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Snrnp40Q6PE01 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC21.54■■□□□ 1.04
Snrnp40Q6PE01 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
Snrnp40Q6PE01 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21.53■■□□□ 1.04
Snrnp40Q6PE01 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Snrnp40Q6PE01 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Snrnp40Q6PE01 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Snrnp40Q6PE01 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Snrnp40Q6PE01 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Snrnp40Q6PE01 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Snrnp40Q6PE01 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Snrnp40Q6PE01 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Snrnp40Q6PE01 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
Snrnp40Q6PE01 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Snrnp40Q6PE01 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Snrnp40Q6PE01 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
Snrnp40Q6PE01 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.46■■□□□ 1.03
Snrnp40Q6PE01 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
Snrnp40Q6PE01 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp40Q6PE01 Smarcc1-203ENSMUST00000197480 1949 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp40Q6PE01 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Snrnp40Q6PE01 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Scarna2-201ENSMUST00000157560 414 ntBASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Snrnp40Q6PE01 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.42■■□□□ 1.02
Snrnp40Q6PE01 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp40Q6PE01 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
Snrnp40Q6PE01 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Snrnp40Q6PE01 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
Snrnp40Q6PE01 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
Snrnp40Q6PE01 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.4■■□□□ 1.02
Snrnp40Q6PE01 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp40Q6PE01 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
Snrnp40Q6PE01 Gm11687-201ENSMUST00000118911 886 ntBASIC21.38■■□□□ 1.01
Snrnp40Q6PE01 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp40Q6PE01 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
Snrnp40Q6PE01 Fam241a-201ENSMUST00000057198 1607 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Gm9806-201ENSMUST00000051080 552 ntBASIC21.37■■□□□ 1.01
Snrnp40Q6PE01 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp40Q6PE01 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Snrnp40Q6PE01 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp40Q6PE01 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
Snrnp40Q6PE01 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Gm12366-201ENSMUST00000121722 873 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Gm5786-201ENSMUST00000085368 882 ntBASIC21.34■■□□□ 1.01
Snrnp40Q6PE01 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Gm16437-201ENSMUST00000025669 507 ntBASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Snrnp40Q6PE01 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC21.33■■□□□ 1
Snrnp40Q6PE01 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Gm4799-201ENSMUST00000095396 657 ntBASIC21.32■■□□□ 1
Snrnp40Q6PE01 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Snrnp40Q6PE01 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC21.31■■□□□ 1
Snrnp40Q6PE01 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp40Q6PE01 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Snrnp40Q6PE01 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Snrnp40Q6PE01 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.3■■□□□ 1
Snrnp40Q6PE01 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC21.3■■□□□ 1
Snrnp40Q6PE01 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.29■■□□□ 1
Snrnp40Q6PE01 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.29■■□□□ 1
Snrnp40Q6PE01 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.28■■□□□ 1
Snrnp40Q6PE01 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Snrnp40Q6PE01 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.27■■□□□ 1
Snrnp40Q6PE01 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.27■■□□□ 1
Snrnp40Q6PE01 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.26■□□□□ 0.99
Snrnp40Q6PE01 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms