Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Scarna2-201ENSMUST00000157560 414 ntBASIC27.18■■□□□ 1.94
ShbQ6PD21 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ShbQ6PD21 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC27.17■■□□□ 1.94
ShbQ6PD21 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
ShbQ6PD21 Particl-201ENSMUST00000205370 1560 ntBASIC27.17■■□□□ 1.94
ShbQ6PD21 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ShbQ6PD21 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC27.16■■□□□ 1.94
ShbQ6PD21 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
ShbQ6PD21 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
ShbQ6PD21 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ShbQ6PD21 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
ShbQ6PD21 Fam69b-201ENSMUST00000074240 1622 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
ShbQ6PD21 Pdia5-201ENSMUST00000023550 1808 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ShbQ6PD21 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
ShbQ6PD21 Gm2415-204ENSMUST00000190235 2004 ntBASIC27.14■■□□□ 1.93
ShbQ6PD21 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ShbQ6PD21 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
ShbQ6PD21 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
ShbQ6PD21 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
ShbQ6PD21 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
ShbQ6PD21 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ShbQ6PD21 Gjc1-201ENSMUST00000068933 1903 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
ShbQ6PD21 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
ShbQ6PD21 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
ShbQ6PD21 Ctbp1-206ENSMUST00000201575 2091 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
ShbQ6PD21 Gm11687-201ENSMUST00000118911 886 ntBASIC27.09■■□□□ 1.93
ShbQ6PD21 Gm9806-201ENSMUST00000051080 552 ntBASIC27.09■■□□□ 1.93
ShbQ6PD21 Gm4799-201ENSMUST00000095396 657 ntBASIC27.09■■□□□ 1.93
ShbQ6PD21 Gm15039-201ENSMUST00000118914 875 ntBASIC27.08■■□□□ 1.93
ShbQ6PD21 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
ShbQ6PD21 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC27.07■■□□□ 1.92
ShbQ6PD21 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
ShbQ6PD21 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC27.07■■□□□ 1.92
ShbQ6PD21 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
ShbQ6PD21 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC27.06■■□□□ 1.92
ShbQ6PD21 Gm30023-201ENSMUST00000197970 889 ntBASIC27.06■■□□□ 1.92
ShbQ6PD21 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
ShbQ6PD21 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC27.05■■□□□ 1.92
ShbQ6PD21 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
ShbQ6PD21 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ShbQ6PD21 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC27.03■■□□□ 1.92
ShbQ6PD21 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC27.03■■□□□ 1.92
ShbQ6PD21 Gm16437-201ENSMUST00000025669 507 ntBASIC27.02■■□□□ 1.92
ShbQ6PD21 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
ShbQ6PD21 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
ShbQ6PD21 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC26.99■■□□□ 1.91
ShbQ6PD21 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26.98■■□□□ 1.91
ShbQ6PD21 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
ShbQ6PD21 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
ShbQ6PD21 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
ShbQ6PD21 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.95■■□□□ 1.9
ShbQ6PD21 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26.95■■□□□ 1.9
ShbQ6PD21 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ShbQ6PD21 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC26.94■■□□□ 1.9
ShbQ6PD21 Gm7332-201ENSMUST00000118351 454 ntBASIC26.94■■□□□ 1.9
ShbQ6PD21 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26.94■■□□□ 1.9
ShbQ6PD21 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
ShbQ6PD21 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ShbQ6PD21 Dlx4-201ENSMUST00000021241 2282 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ShbQ6PD21 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
ShbQ6PD21 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26.91■■□□□ 1.9
ShbQ6PD21 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.91■■□□□ 1.9
ShbQ6PD21 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ShbQ6PD21 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
ShbQ6PD21 Pkd1-207ENSMUST00000228550 1050 ntBASIC26.9■■□□□ 1.9
ShbQ6PD21 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
ShbQ6PD21 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.89■■□□□ 1.89
ShbQ6PD21 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26.88■■□□□ 1.89
ShbQ6PD21 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC26.88■■□□□ 1.89
ShbQ6PD21 Gm27502-201ENSMUST00000183495 199 ntBASIC26.88■■□□□ 1.89
ShbQ6PD21 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ShbQ6PD21 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ShbQ6PD21 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
ShbQ6PD21 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
ShbQ6PD21 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
ShbQ6PD21 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26.86■■□□□ 1.89
ShbQ6PD21 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
ShbQ6PD21 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
ShbQ6PD21 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
ShbQ6PD21 AC154454.1-201ENSMUST00000225253 216 ntBASIC26.83■■□□□ 1.89
ShbQ6PD21 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
ShbQ6PD21 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
ShbQ6PD21 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26.82■■□□□ 1.88
ShbQ6PD21 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26.82■■□□□ 1.88
ShbQ6PD21 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ShbQ6PD21 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ShbQ6PD21 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ShbQ6PD21 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
ShbQ6PD21 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26.77■■□□□ 1.88
ShbQ6PD21 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ShbQ6PD21 Mir3960-201ENSMUST00000198213 73 ntBASIC26.77■■□□□ 1.88
ShbQ6PD21 Pcf11-205ENSMUST00000208255 1720 ntBASIC26.76■■□□□ 1.88
ShbQ6PD21 Gm45364-201ENSMUST00000210883 159 ntBASIC26.76■■□□□ 1.87
ShbQ6PD21 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ShbQ6PD21 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ShbQ6PD21 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ShbQ6PD21 Gm22567-201ENSMUST00000175542 342 ntBASIC26.75■■□□□ 1.87
ShbQ6PD21 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ShbQ6PD21 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ShbQ6PD21 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
Retrieved 100 of 76,532 protein–RNA pairs in 190.9 ms