Protein–RNA interactions for Protein: Q6ISU1

PTCRA, Pre T-cell antigen receptor alpha, humanhuman

Predicted RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCRAQ6ISU1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.54■■■□□ 2
PTCRAQ6ISU1 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.54■■■□□ 2
PTCRAQ6ISU1 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
PTCRAQ6ISU1 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC27.53■■■□□ 2
PTCRAQ6ISU1 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
PTCRAQ6ISU1 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC27.53■■■□□ 2
PTCRAQ6ISU1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC27.52■■■□□ 2
PTCRAQ6ISU1 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC27.51■■□□□ 1.99
PTCRAQ6ISU1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCRAQ6ISU1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PTCRAQ6ISU1 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC27.5■■□□□ 1.99
PTCRAQ6ISU1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC27.5■■□□□ 1.99
PTCRAQ6ISU1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
PTCRAQ6ISU1 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
PTCRAQ6ISU1 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
PTCRAQ6ISU1 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.48■■□□□ 1.99
PTCRAQ6ISU1 U85056.1-201ENST00000616429 682 ntBASIC27.48■■□□□ 1.99
PTCRAQ6ISU1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
PTCRAQ6ISU1 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCRAQ6ISU1 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCRAQ6ISU1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
PTCRAQ6ISU1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC27.46■■□□□ 1.99
PTCRAQ6ISU1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.45■■□□□ 1.99
PTCRAQ6ISU1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.45■■□□□ 1.98
PTCRAQ6ISU1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
PTCRAQ6ISU1 HYI-213ENST00000583037 1322 ntTSL 5 BASIC27.43■■□□□ 1.98
PTCRAQ6ISU1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
PTCRAQ6ISU1 GFER-205ENST00000569451 517 ntTSL 5 BASIC27.43■■□□□ 1.98
PTCRAQ6ISU1 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC27.43■■□□□ 1.98
PTCRAQ6ISU1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.42■■□□□ 1.98
PTCRAQ6ISU1 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC27.42■■□□□ 1.98
PTCRAQ6ISU1 LINC00273-201ENST00000539813 1452 ntBASIC27.41■■□□□ 1.98
PTCRAQ6ISU1 RARRES2P1-201ENST00000474487 481 ntBASIC27.41■■□□□ 1.98
PTCRAQ6ISU1 TSPY13P-201ENST00000338964 914 ntBASIC27.4■■□□□ 1.98
PTCRAQ6ISU1 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.4■■□□□ 1.98
PTCRAQ6ISU1 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.39■■□□□ 1.98
PTCRAQ6ISU1 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.98
PTCRAQ6ISU1 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC27.38■■□□□ 1.97
PTCRAQ6ISU1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PTCRAQ6ISU1 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.38■■□□□ 1.97
PTCRAQ6ISU1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
PTCRAQ6ISU1 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
PTCRAQ6ISU1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
PTCRAQ6ISU1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.36■■□□□ 1.97
PTCRAQ6ISU1 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCRAQ6ISU1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PTCRAQ6ISU1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PTCRAQ6ISU1 AC004987.1-201ENST00000428627 508 ntBASIC27.34■■□□□ 1.97
PTCRAQ6ISU1 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC27.33■■□□□ 1.97
PTCRAQ6ISU1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PTCRAQ6ISU1 ATP5G2P3-201ENST00000429083 425 ntBASIC27.32■■□□□ 1.96
PTCRAQ6ISU1 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC27.32■■□□□ 1.96
PTCRAQ6ISU1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PTCRAQ6ISU1 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC27.31■■□□□ 1.96
PTCRAQ6ISU1 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PTCRAQ6ISU1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC27.31■■□□□ 1.96
PTCRAQ6ISU1 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC27.3■■□□□ 1.96
PTCRAQ6ISU1 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
PTCRAQ6ISU1 KRT18P60-201ENST00000312876 1297 ntBASIC27.29■■□□□ 1.96
PTCRAQ6ISU1 GUK1-208ENST00000366728 842 ntTSL 2 BASIC27.29■■□□□ 1.96
PTCRAQ6ISU1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.29■■□□□ 1.96
PTCRAQ6ISU1 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PTCRAQ6ISU1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC27.29■■□□□ 1.96
PTCRAQ6ISU1 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC27.28■■□□□ 1.96
PTCRAQ6ISU1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
PTCRAQ6ISU1 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC27.27■■□□□ 1.96
PTCRAQ6ISU1 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC27.26■■□□□ 1.96
PTCRAQ6ISU1 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PTCRAQ6ISU1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCRAQ6ISU1 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC27.25■■□□□ 1.95
PTCRAQ6ISU1 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCRAQ6ISU1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
PTCRAQ6ISU1 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
PTCRAQ6ISU1 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
PTCRAQ6ISU1 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
PTCRAQ6ISU1 AC060814.1-201ENST00000554326 538 ntBASIC27.23■■□□□ 1.95
PTCRAQ6ISU1 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
PTCRAQ6ISU1 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC27.23■■□□□ 1.95
PTCRAQ6ISU1 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
PTCRAQ6ISU1 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
PTCRAQ6ISU1 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC27.2■■□□□ 1.94
PTCRAQ6ISU1 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PTCRAQ6ISU1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC27.19■■□□□ 1.94
PTCRAQ6ISU1 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC27.19■■□□□ 1.94
PTCRAQ6ISU1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC27.19■■□□□ 1.94
PTCRAQ6ISU1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PTCRAQ6ISU1 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC27.18■■□□□ 1.94
PTCRAQ6ISU1 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PTCRAQ6ISU1 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PTCRAQ6ISU1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.17■■□□□ 1.94
PTCRAQ6ISU1 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PTCRAQ6ISU1 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
PTCRAQ6ISU1 HES4-204ENST00000484667 667 ntTSL 3 BASIC27.16■■□□□ 1.94
PTCRAQ6ISU1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC27.16■■□□□ 1.94
PTCRAQ6ISU1 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PTCRAQ6ISU1 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PTCRAQ6ISU1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PTCRAQ6ISU1 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC27.14■■□□□ 1.94
PTCRAQ6ISU1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC27.14■■□□□ 1.94
PTCRAQ6ISU1 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.14■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms