Protein–RNA interactions for Protein: Q62203

Sf3a2, Splicing factor 3A subunit 2, mousemouse

Known RBP Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a2Q62203 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a2Q62203 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Sf3a2Q62203 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Sf3a2Q62203 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Sf3a2Q62203 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Sf3a2Q62203 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Sf3a2Q62203 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a2Q62203 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a2Q62203 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Sf3a2Q62203 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a2Q62203 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC19.06■□□□□ 0.64
Sf3a2Q62203 Mcat-201ENSMUST00000061882 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a2Q62203 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Sf3a2Q62203 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Sf3a2Q62203 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Sf3a2Q62203 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a2Q62203 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a2Q62203 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a2Q62203 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a2Q62203 Tlx3-201ENSMUST00000037746 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Sf3a2Q62203 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a2Q62203 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Sf3a2Q62203 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a2Q62203 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC19.02■□□□□ 0.64
Sf3a2Q62203 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Sf3a2Q62203 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Sf3a2Q62203 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC19.01■□□□□ 0.63
Sf3a2Q62203 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a2Q62203 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
Sf3a2Q62203 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC19.01■□□□□ 0.63
Sf3a2Q62203 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a2Q62203 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
Sf3a2Q62203 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a2Q62203 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Sf3a2Q62203 A530058N18Rik-207ENSMUST00000152254 1211 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a2Q62203 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a2Q62203 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC19■□□□□ 0.63
Sf3a2Q62203 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a2Q62203 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a2Q62203 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sf3a2Q62203 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC18.99■□□□□ 0.63
Sf3a2Q62203 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Sf3a2Q62203 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
Sf3a2Q62203 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
Sf3a2Q62203 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
Sf3a2Q62203 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a2Q62203 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Sf3a2Q62203 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a2Q62203 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC18.97■□□□□ 0.63
Sf3a2Q62203 Gm527-201ENSMUST00000058135 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Sf3a2Q62203 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sf3a2Q62203 Hoxa13-201ENSMUST00000047993 1309 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sf3a2Q62203 Aard-201ENSMUST00000090025 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Sf3a2Q62203 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
Sf3a2Q62203 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a2Q62203 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
Sf3a2Q62203 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Sf3a2Q62203 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
Sf3a2Q62203 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a2Q62203 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a2Q62203 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
Sf3a2Q62203 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Sf3a2Q62203 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a2Q62203 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Sf3a2Q62203 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
Sf3a2Q62203 Cacfd1-204ENSMUST00000114006 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a2Q62203 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a2Q62203 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a2Q62203 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Sf3a2Q62203 Twist1-201ENSMUST00000049089 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a2Q62203 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Sf3a2Q62203 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a2Q62203 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Sf3a2Q62203 Pcf11-205ENSMUST00000208255 1720 ntBASIC18.89■□□□□ 0.61
Sf3a2Q62203 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a2Q62203 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a2Q62203 Yrdc-201ENSMUST00000102628 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Sf3a2Q62203 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Sf3a2Q62203 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC18.88■□□□□ 0.61
Sf3a2Q62203 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a2Q62203 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC18.87■□□□□ 0.61
Sf3a2Q62203 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Sf3a2Q62203 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
Sf3a2Q62203 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a2Q62203 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a2Q62203 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a2Q62203 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Sf3a2Q62203 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms